Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CBLN4
  • Mouse genes Cbln4
  • Rat genes Cbln4
  • Zfish genes cbln4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cbln4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Cbln4	IPI	UniProtKB:P0DI97|UniProtKB:P70211|UniProtKB:Q8C985	Mouse	MGI:MGI:6271505|PMID:29782851
Molecular Function	GO:0005515	protein binding	Cbln4	IPI	PR:Q8BGU2	Mouse	PMID:17331201
Molecular Function	GO:0005515	protein binding	Cbln4	IPI	PR:Q9JHG0	Mouse	PMID:17331201
Molecular Function	GO:0005515	protein binding	Cbln4	IPI	PR:E9Q7X7	Mouse	PMID:21356198
Molecular Function	GO:0005515	protein binding	Cbln4	IPI	PR:Q9CS84	Mouse	PMID:21356198
Molecular Function	GO:0005515	protein binding	Cbln4	IPI	PR:Q9R171	Mouse	PMID:17331201
Cellular Component	GO:0062023	collagen-containing extracellular matrix	CBLN4	HDA		Human	PMID:25037231
Cellular Component	GO:0005576	extracellular region	Cbln4	IDA		Mouse	MGI:MGI:6271505|PMID:29782851
Cellular Component	GO:0005615	extracellular space	Cbln4	IDA		Mouse	PMID:17331201
Cellular Component	GO:0098982	GABA-ergic synapse	Cbln4	IDA		Mouse	MGI:MGI:6383349|PMID:25534236
Biological Process	GO:1904862	inhibitory synapse assembly	Cbln4	IMP		Mouse	MGI:MGI:6280523|PMID:30679375
Biological Process	GO:1904862	inhibitory synapse assembly	Cbln4	IMP		Mouse	MGI:MGI:6383349|PMID:25534236
Biological Process	GO:0009306	protein secretion	Cbln4	IDA		Mouse	PMID:17030622

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern