Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CAVIN4
  • Mouse genes Cavin4
  • Rat genes Cavin4
  • Zfish genes cavin4a,cavin4b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cavin4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CAVIN4	IPI	UniProtKB:O95810|UniProtKB:P35348|UniProtKB:P35368|UniProtKB:Q6NZI2	Human	PMID:24567387
Molecular Function	GO:0005515	protein binding	CAVIN4	IPI	UniProtKB:P56539	Human	PMID:24567387
Molecular Function	GO:0005515	protein binding	CAVIN4	IPI	UniProtKB:P56539	Human	PMID:26497963
Molecular Function	GO:0005515	protein binding	CAVIN4	IPI	UniProtKB:Q13895	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN4	IPI	UniProtKB:Q8N5A5-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN4	IPI	UniProtKB:Q96HA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Cavin4	IPI	UniProtKB:P21708|UniProtKB:P63086	Rat	PMID:24567387|RGD:12907554
Cellular Component	GO:0005901	caveola	CAVIN4	IDA		Human	PMID:19525939
Cellular Component	GO:0005901	caveola	Cavin4	IDA		Mouse	MGI:MGI:5556332|PMID:24567387
Cellular Component	GO:0005901	caveola	Cavin4	IDA		Rat	PMID:24567387|RGD:12907554
Cellular Component	GO:0005886	plasma membrane	CAVIN4	IDA		Human	PMID:26497963
Cellular Component	GO:0005886	plasma membrane	Cavin4	IDA		Mouse	MGI:MGI:5763521|PMID:26497963
Cellular Component	GO:0005886	plasma membrane	Cavin4	IDA		Mouse	MGI:MGI:5556332|PMID:24567387
Cellular Component	GO:0005886	plasma membrane	Cavin4	IDA		Rat	PMID:24567387|RGD:12907554
Cellular Component	GO:0016528	sarcoplasm	Cavin4	IDA		Mouse	PMID:18332105
Cellular Component	GO:0030018	Z disc	Cavin4	IDA		Mouse	PMID:18332105
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Cavin4	IDA		Mouse	PMID:18332105
Biological Process	GO:0010468	regulation of gene expression	CAVIN4	IMP		Human	PMID:21642240
Biological Process	GO:0048741	skeletal muscle fiber development	cavin4b	IMP	ZFIN:ZDB-GENO-160829-3	Zfish	PMID:27294373
Biological Process	GO:0033292	T-tubule organization	cavin4b	IMP	ZFIN:ZDB-GENO-160829-3	Zfish	PMID:27294373

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern