Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CARHSP1
  • Mouse genes Carhsp1
  • Rat genes Carhsp1
  • Zfish genes carhsp1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Carhsp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003730	mRNA 3'-UTR binding	CARHSP1	IDA		Human	PMID:21078874
Molecular Function	GO:0005515	protein binding	CARHSP1	IPI	UniProtKB:P60409	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CARHSP1	IPI	UniProtKB:P60410	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CARHSP1	IPI	UniProtKB:Q13077	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CARHSP1	IPI	UniProtKB:Q7Z3S9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CARHSP1	IPI	UniProtKB:Q8ND90	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CARHSP1	IPI	UniProtKB:Q8NF50	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CARHSP1	IPI	UniProtKB:Q8NF50-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CARHSP1	IPI	UniProtKB:A8MQ03	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CARHSP1	IPI	UniProtKB:P0DPK4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CARHSP1	IPI	UniProtKB:P30153	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CARHSP1	IPI	UniProtKB:P60410	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CARHSP1	IPI	UniProtKB:Q9H8Y8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CARHSP1	IPI	UniProtKB:Q9UJV3-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CARHSP1	IPI	UniProtKB:Q9ULX6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Carhsp1	IPI	PR:Q60969	Mouse	PMID:11842224
Cellular Component	GO:0005737	cytoplasm	Carhsp1	IDA		Rat	PMID:9712905|RGD:1299427
Cellular Component	GO:0000177	cytoplasmic exosome (RNase complex)	Carhsp1	IDA		Mouse	MGI:MGI:5320273|PMID:21078874
Cellular Component	GO:0005829	cytosol	Carhsp1	IDA		Mouse	MGI:MGI:5320273|PMID:21078874
Cellular Component	GO:0043186	P granule	Carhsp1	IDA		Mouse	MGI:MGI:5320273|PMID:21078874
Biological Process	GO:0043488	regulation of mRNA stability	Carhsp1	IMP		Mouse	MGI:MGI:5320273|PMID:21078874

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern