Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CA13
  • Mouse genes Car13
  • Rat genes Car13
  • Zfish genes ca2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Car13

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004089	carbonate dehydratase activity	Car13	IDA		Mouse	PMID:14600151
Molecular Function	GO:0004089	carbonate dehydratase activity	ca2	IMP	ZFIN:ZDB-MRPHLNO-100517-6	Zfish	PMID:19915126
Molecular Function	GO:0004089	carbonate dehydratase activity	ca2	IGI	ZFIN:ZDB-MRPHLNO-100517-5,ZFIN:ZDB-MRPHLNO-100517-6	Zfish	PMID:19915126
Molecular Function	GO:0005515	protein binding	CA13	IPI	UniProtKB:Q6UUV7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CA13	IPI	UniProtKB:Q8N4Y2-3	Human	PMID:32296183
Cellular Component	GO:0005829	cytosol	Car13	IDA		Mouse	PMID:14600151
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	Car13	IDA		Mouse	PMID:24789143
Cellular Component	GO:0043209	myelin sheath	Car13	IDA		Mouse	PMID:14600151
Biological Process	GO:0015670	carbon dioxide transport	ca2	IMP	ZFIN:ZDB-MRPHLNO-100517-6	Zfish	PMID:19915126
Biological Process	GO:0015670	carbon dioxide transport	ca2	IGI	ZFIN:ZDB-MRPHLNO-100517-5,ZFIN:ZDB-MRPHLNO-100517-6	Zfish	PMID:19915126
Biological Process	GO:0071466	cellular response to xenobiotic stimulus	ca2	IDA		Zfish	PMID:18618001
Biological Process	GO:0042539	hypotonic salinity response	ca2	IDA		Zfish	PMID:17299134
Biological Process	GO:0006885	regulation of pH	ca2	IMP	ZFIN:ZDB-MRPHLNO-080923-3	Zfish	PMID:18322140
Biological Process	GO:0098719	sodium ion import across plasma membrane	ca2	IMP	ZFIN:ZDB-MRPHLNO-130611-3	Zfish	PMID:23565095
Biological Process	GO:0006814	sodium ion transport	ca2	IMP	ZFIN:ZDB-MRPHLNO-080923-3	Zfish	PMID:18322140

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern