Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CABYR
  • Mouse genes Cabyr
  • Rat genes Cabyr
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cabyr

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005509	calcium ion binding	CABYR	IDA		Human	PMID:11820818
Molecular Function	GO:0005509	calcium ion binding	Cabyr	IDA		Mouse	PMID:17855365
Molecular Function	GO:0005515	protein binding	Cabyr	IPI	PR:O88987	Mouse	PMID:20731842
Molecular Function	GO:0005515	protein binding	Cabyr	IPI	PR:Q9ESG2	Mouse	PMID:20731842
Molecular Function	GO:0005515	protein binding	Cabyr	IPI	PR:A1EGX6	Mouse	PMID:17855365
Molecular Function	GO:0005515	protein binding	Cabyr	IPI	PR:Q60662	Mouse	PMID:20731842
Molecular Function	GO:0019904	protein domain specific binding	Cabyr	IPI	UniProtKB:O88987|UniProtKB:Q60662	Mouse	MGI:MGI:4944160|PMID:20731842
Cellular Component	GO:0005737	cytoplasm	CABYR	IDA		Human	PMID:11820818
Cellular Component	GO:0005737	cytoplasm	CABYR	IDA		Human	PMID:18421703
Cellular Component	GO:0005737	cytoplasm	Cabyr	IDA		Mouse	MGI:MGI:4944160|PMID:20731842
Cellular Component	GO:0005829	cytosol	CABYR	IDA		Human	GO_REF:0000052
Cellular Component	GO:0031514	motile cilium	CABYR	IDA		Human	PMID:18421703
Cellular Component	GO:0031514	motile cilium	Cabyr	IDA		Mouse	PMID:12801634
Cellular Component	GO:0005654	nucleoplasm	CABYR	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	CABYR	HDA		Human	PMID:21630459
Cellular Component	GO:0097229	sperm end piece	Cabyr	IDA		Mouse	PMID:17855365
Cellular Component	GO:0035686	sperm fibrous sheath	CABYR	IDA		Human	PMID:11820818
Cellular Component	GO:0035686	sperm fibrous sheath	Cabyr	IDA		Mouse	MGI:MGI:4944160|PMID:20731842
Cellular Component	GO:0097228	sperm principal piece	Cabyr	IDA		Mouse	PMID:17855365

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern