Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CABP4
  • Mouse genes Cabp4
  • Rat genes Cabp4
  • Zfish genes cabp4,si:cabz01076231.1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cabp4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0044325	transmembrane transporter binding	CABP4	IPI	UniProtKB:O60840-1|UniProtKB:O60840-5	Human	PMID:27226626
Cellular Component	GO:0005829	cytosol	CABP4	IDA		Human	PMID:19338761
Biological Process	GO:0008594	photoreceptor cell morphogenesis	Cabp4	IMP	MGI:MGI:3056615	Mouse	PMID:16249514
Biological Process	GO:0007602	phototransduction	Cabp4	IMP	MGI:MGI:3056615	Mouse	PMID:16249514
Biological Process	GO:0060040	retinal bipolar neuron differentiation	Cabp4	IMP	MGI:MGI:3056615	Mouse	PMID:16249514
Biological Process	GO:0046549	retinal cone cell development	Cabp4	IMP	MGI:MGI:3056615	Mouse	PMID:16249514
Biological Process	GO:0007601	visual perception	CABP4	IMP		Human	PMID:16960802

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern