Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BNC2
  • Mouse genes Bnc2
  • Rat genes Bnc2
  • Zfish genes bnc2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Bnc2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	Bnc2	IDA		Mouse	PMID:15081112
Molecular Function	GO:0005515	protein binding	BNC2	IPI	UniProtKB:P25800	Human	PMID:32296183
Molecular Function	GO:0000182	rDNA binding	Bnc2	IDA		Mouse	MGI:MGI:3039345|PMID:15081112
Cellular Component	GO:0000785	chromatin	Bnc2	IDA		Mouse	MGI:MGI:3039345|PMID:15081112
Cellular Component	GO:0005654	nucleoplasm	BNC2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Bnc2	IDA		Mouse	PMID:15081112
Cellular Component	GO:0005634	nucleus	bnc2	IDA		Zfish	PMID:19956727
Biological Process	GO:0048066	developmental pigmentation	bnc2	IMP	ZFIN:ZDB-GENO-100312-2	Zfish	PMID:19956727
Biological Process	GO:0048066	developmental pigmentation	bnc2	IGI	ZFIN:ZDB-GENE-980526-464	Zfish	PMID:19956727
Biological Process	GO:0048066	developmental pigmentation	bnc2	IGI	ZFIN:ZDB-GENE-001205-1	Zfish	PMID:19956727
Biological Process	GO:0048066	developmental pigmentation	bnc2	IGI	ZFIN:ZDB-GENE-001205-1,ZFIN:ZDB-GENE-980526-464	Zfish	PMID:19956727
Biological Process	GO:0048066	developmental pigmentation	bnc2	IGI	ZFIN:ZDB-GENE-030616-115	Zfish	PMID:19956727
Biological Process	GO:0048066	developmental pigmentation	bnc2	IMP	ZFIN:ZDB-GENO-100312-1	Zfish	PMID:23737760
Biological Process	GO:0048066	developmental pigmentation	bnc2	IMP	ZFIN:ZDB-GENO-100312-1	Zfish	PMID:19956727
Biological Process	GO:0003416	endochondral bone growth	Bnc2	IMP	MGI:MGI:3639337	Mouse	PMID:19706529
Biological Process	GO:0060485	mesenchyme development	Bnc2	IMP	MGI:MGI:3639337	Mouse	PMID:19706529
Biological Process	GO:0039020	pronephric nephron tubule development	bnc2	IMP	ZFIN:ZDB-CRISPR-191031-4	Zfish	PMID:31051115
Biological Process	GO:0039020	pronephric nephron tubule development	bnc2	IMP	ZFIN:ZDB-MRPHLNO-191004-3	Zfish	PMID:31051115
Biological Process	GO:0039020	pronephric nephron tubule development	bnc2	IMP	ZFIN:ZDB-CRISPR-191031-5	Zfish	PMID:31051115
Biological Process	GO:0060021	roof of mouth development	Bnc2	IMP	MGI:MGI:3639337	Mouse	PMID:19706529
Biological Process	GO:0043586	tongue development	Bnc2	IMP	MGI:MGI:3639337	Mouse	PMID:19706529

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern