Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BNC1
  • Mouse genes Bnc1
  • Rat genes Bnc1
  • Zfish genes bnc1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Bnc1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001216	DNA-binding transcription activator activity	BNC1	IDA		Human	PMID:11152639
Molecular Function	GO:0005515	protein binding	Bnc1	IPI	UniProtKB:Q9D4G2	Mouse	MGI:MGI:5500092|PMID:23707421
Molecular Function	GO:0000182	rDNA binding	BNC1	IDA		Human	PMID:10449744
Molecular Function	GO:0000182	rDNA binding	BNC1	IDA		Human	PMID:11152639
Cellular Component	GO:0005737	cytoplasm	Bnc1	IDA		Mouse	PMID:9810705
Cellular Component	GO:0005730	nucleolus	Bnc1	IDA		Mouse	MGI:MGI:6450623|PMID:11152639
Cellular Component	GO:0005654	nucleoplasm	BNC1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	BNC1	IDA		Human	PMID:30010909
Cellular Component	GO:0005634	nucleus	Bnc1	IDA		Mouse	PMID:9810705
Biological Process	GO:0051276	chromosome organization	Bnc1	IMP		Mouse	PMID:16624857
Biological Process	GO:0050673	epithelial cell proliferation	Bnc1	IMP	MGI:MGI:3771811	Mouse	PMID:17971852
Biological Process	GO:0050679	positive regulation of epithelial cell proliferation	Bnc1	IMP	MGI:MGI:3771811	Mouse	PMID:17971852
Biological Process	GO:1900195	positive regulation of oocyte maturation	BNC1	IMP		Human	PMID:30010909
Biological Process	GO:0045943	positive regulation of transcription by RNA polymerase I	BNC1	IDA		Human	PMID:11152639
Biological Process	GO:0006356	regulation of transcription by RNA polymerase I	Bnc1	IMP		Mouse	PMID:16624857
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	Bnc1	IMP		Mouse	PMID:16624857
Biological Process	GO:0042060	wound healing	Bnc1	IMP	MGI:MGI:3771811	Mouse	PMID:17971852

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern