Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BHLHE23
  • Mouse genes Bhlhe23
  • Rat genes Bhlhe23
  • Zfish genes bhlhe23
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Bhlhe23

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	BHLHE23	IPI	UniProtKB:O76011	Human	PMID:32296183
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	BHLHE23	IDA		Human	PMID:28473536
Biological Process	GO:1901215	negative regulation of neuron death	Bhlhe23	IMP	MGI:MGI:3054837	Mouse	PMID:15363390
Biological Process	GO:0046671	negative regulation of retinal cell programmed cell death	Bhlhe23	IMP	MGI:MGI:3054837	Mouse	PMID:15363390
Biological Process	GO:0070997	neuron death	Bhlhe23	IMP	MGI:MGI:3054837	Mouse	PMID:15363390
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Bhlhe23	IDA		Mouse	PMID:11863370
Biological Process	GO:0048050	post-embryonic eye morphogenesis	Bhlhe23	IMP	MGI:MGI:3054837	Mouse	PMID:15363390
Biological Process	GO:0046666	retinal cell programmed cell death	Bhlhe23	IMP	MGI:MGI:3054837	Mouse	PMID:15363390
Biological Process	GO:0046548	retinal rod cell development	Bhlhe23	IMP	MGI:MGI:3054837	Mouse	PMID:17255172

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern