Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BABAM2
  • Mouse genes Babam2
  • Rat genes Babam2
  • Zfish genes babam2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Babam2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0031593	polyubiquitin modification-dependent protein binding	BABAM2	IDA		Human	PMID:19261749
Molecular Function	GO:0005515	protein binding	BABAM2	IPI	UniProtKB:P46736	Human	PMID:14636569
Molecular Function	GO:0005515	protein binding	BABAM2	IPI	UniProtKB:P19438	Human	PMID:15465831
Molecular Function	GO:0005515	protein binding	BABAM2	IPI	UniProtKB:P25445	Human	PMID:15465831
Molecular Function	GO:0005515	protein binding	BABAM2	IPI	UniProtKB:Q9NWV8	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	BABAM2	IPI	UniProtKB:P46736	Human	PMID:19261748
Molecular Function	GO:0005515	protein binding	BABAM2	IPI	UniProtKB:Q6UWZ7	Human	PMID:19261748
Molecular Function	GO:0005515	protein binding	BABAM2	IPI	UniProtKB:Q9NWV8	Human	PMID:19261748
Molecular Function	GO:0005515	protein binding	BABAM2	IPI	UniProtKB:Q6UWZ7	Human	PMID:19261749
Molecular Function	GO:0005515	protein binding	BABAM2	IPI	UniProtKB:Q9NWV8	Human	PMID:19615732
Molecular Function	GO:0005515	protein binding	BABAM2	IPI	UniProtKB:Q9NWV8	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	BABAM2	IPI	UniProtKB:Q9NWV8	Human	PMID:31515488
Molecular Function	GO:0005164	tumor necrosis factor receptor binding	BABAM2	IDA		Human	PMID:15465831
Molecular Function	GO:0005164	tumor necrosis factor receptor binding	Babam2	IDA		Mouse	MGI:MGI:1278070|PMID:9737713
Cellular Component	GO:0070531	BRCA1-A complex	BABAM2	IDA		Human	PMID:17525341
Cellular Component	GO:0070531	BRCA1-A complex	BABAM2	IDA		Human	PMID:19261746
Cellular Component	GO:0070531	BRCA1-A complex	BABAM2	IDA		Human	PMID:19261748
Cellular Component	GO:0070531	BRCA1-A complex	BABAM2	IDA		Human	PMID:19261749
Cellular Component	GO:0070552	BRISC complex	BABAM2	IDA		Human	PMID:19214193
Cellular Component	GO:0070552	BRISC complex	BABAM2	IDA		Human	PMID:24075985
Cellular Component	GO:0005737	cytoplasm	BABAM2	IDA		Human	PMID:15465831
Cellular Component	GO:0005737	cytoplasm	BABAM2	IDA		Human	PMID:24075985
Cellular Component	GO:0005829	cytosol	BABAM2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000152	nuclear ubiquitin ligase complex	BABAM2	IDA		Human	PMID:14636569
Cellular Component	GO:0005634	nucleus	BABAM2	IDA		Human	PMID:14636569
Cellular Component	GO:0005634	nucleus	BABAM2	IDA		Human	PMID:15465831
Cellular Component	GO:0005634	nucleus	BABAM2	IDA		Human	PMID:19261748
Cellular Component	GO:0005634	nucleus	BABAM2	IDA		Human	PMID:24075985
Biological Process	GO:0071479	cellular response to ionizing radiation	BABAM2	IMP		Human	PMID:14636569
Biological Process	GO:0006974	DNA damage response	BABAM2	IEP		Human	PMID:7826398
Biological Process	GO:0006302	double-strand break repair	BABAM2	IMP		Human	PMID:19261748
Biological Process	GO:0007095	mitotic G2 DNA damage checkpoint signaling	BABAM2	IMP		Human	PMID:19261748
Biological Process	GO:0043066	negative regulation of apoptotic process	BABAM2	IDA		Human	PMID:15465831
Biological Process	GO:0045739	positive regulation of DNA repair	BABAM2	IMP		Human	PMID:19261748
Biological Process	GO:0010212	response to ionizing radiation	BABAM2	IMP		Human	PMID:19261748
Biological Process	GO:0010212	response to ionizing radiation	BABAM2	IMP		Human	PMID:19261749

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern