Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes B3GAT1
  • Mouse genes B3gat1
  • Rat genes B3gat1
  • Zfish genes b3gat1a,b3gat1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set B3gat1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	B3gat1	IMP	MGI:MGI:3759445	Mouse	PMID:12032138
Molecular Function	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	B3gat1	IDA		Rat	PMID:19181664|RGD:11535107
Molecular Function	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	B3gat1	IDA		Rat	PMID:9177175|RGD:70805
Molecular Function	GO:0005515	protein binding	B3GAT1	IPI	UniProtKB:Q96FZ5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	B3gat1	IPI	UniProtKB:Q9NR31	Rat	PMID:19181664|RGD:11535107
Cellular Component	GO:0005789	endoplasmic reticulum membrane	B3gat1	IDA		Rat	PMID:19181664|RGD:11535107
Cellular Component	GO:0000139	Golgi membrane	B3gat1	IDA		Rat	PMID:19181664|RGD:11535107
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	B3GAT1	IDA		Human	GO_REF:0000052
Biological Process	GO:0031103	axon regeneration	b3gat1a	IMP	ZFIN:ZDB-MRPHLNO-180312-4	Zfish	PMID:27086029
Biological Process	GO:0031103	axon regeneration	b3gat1a	IMP	ZFIN:ZDB-MRPHLNO-180312-3	Zfish	PMID:27086029
Biological Process	GO:0071456	cellular response to hypoxia	B3gat1	IEP		Rat	PMID:21400481|RGD:14390075
Biological Process	GO:0006024	glycosaminoglycan biosynthetic process	B3gat1	IMP	MGI:MGI:3759445	Mouse	PMID:26659409
Biological Process	GO:0006024	glycosaminoglycan biosynthetic process	B3gat1	IMP	MGI:MGI:3759445	Mouse	PMID:12032138
Biological Process	GO:0008542	visual learning	B3gat1	IMP	MGI:MGI:3759445	Mouse	PMID:12032138

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern