Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ATRIP
  • Mouse genes Atrip
  • Rat genes Atrip
  • Zfish genes atrip
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Atrip

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0070530	K63-linked polyubiquitin modification-dependent protein binding	ATRIP	IDA		Human	PMID:24332808
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:P43246	Human	PMID:14657349
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:Q13535	Human	PMID:17686975
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:Q13535	Human	PMID:19889979
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:Q9BW66	Human	PMID:19889979
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:Q13535	Human	PMID:20616048
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:P50750	Human	PMID:20930849
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:Q13535	Human	PMID:23144622
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:O15160	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:O43597	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:P00540	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:P13521	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:P20592	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:Q5VWN6-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:Q6P1W5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:Q8NDB6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:Q8TBB1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:Q8WXB1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:Q9BRL4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:Q9BUN5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:Q9BW66	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:Q9UJV3-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATRIP	IPI	UniProtKB:Q9UJX2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	Atrip	IPI	UniProtKB:Q9JKK8	Mouse	MGI:MGI:4830417|PMID:20801936
Cellular Component	GO:0070310	ATR-ATRIP complex	ATRIP	IPI		Human	PMID:11721054
Cellular Component	GO:0070310	ATR-ATRIP complex	Atrip	IPI		Mouse	MGI:MGI:6828548|PMID:11721054
Cellular Component	GO:0005654	nucleoplasm	ATRIP	IDA		Human	GO_REF:0000052

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern