Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ATP6V1D
  • Mouse genes Atp6v1d
  • Rat genes Atp6v1d
  • Zfish genes atp6v1d
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Atp6v1d

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	ATP6V1D	IPI	UniProtKB:P61421	Human	PMID:18752060
Molecular Function	GO:0005515	protein binding	ATP6V1D	IPI	UniProtKB:Q8N8Y2	Human	PMID:18752060
Molecular Function	GO:0005515	protein binding	ATP6V1D	IPI	UniProtKB:Q9Y5X0	Human	PMID:21844891
Molecular Function	GO:0005515	protein binding	ATP6V1D	IPI	UniProtKB:Q8N1B4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATP6V1D	IPI	UniProtKB:O14777	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ATP6V1D	IPI	UniProtKB:Q16864	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ATP6V1D	IPI	UniProtKB:Q7Z3Y8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ATP6V1D	IPI	UniProtKB:Q8N1B4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ATP6V1D	IPI	UniProtKB:Q96CS2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ATP6V1D	IPI	UniProtKB:Q9BUW7	Human	PMID:32296183
Cellular Component	GO:0005813	centrosome	ATP6V1D	IDA		Human	PMID:21844891
Cellular Component	GO:0005929	cilium	ATP6V1D	IDA		Human	PMID:21844891
Cellular Component	GO:0070062	extracellular exosome	ATP6V1D	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	ATP6V1D	HDA		Human	PMID:19199708
Cellular Component	GO:0098850	extrinsic component of synaptic vesicle membrane	Atp6v1d	EXP		Rat	PMID:32165585|RGD:39458019
Cellular Component	GO:0098850	extrinsic component of synaptic vesicle membrane	Atp6v1d	IDA		Rat	PMID:32165585|RGD:39458019
Cellular Component	GO:0005765	lysosomal membrane	ATP6V1D	HDA		Human	PMID:17897319
Cellular Component	GO:0016020	membrane	ATP6V1D	IDA		Human	PMID:18752060
Cellular Component	GO:0016020	membrane	ATP6V1D	IDA		Human	PMID:33065002
Cellular Component	GO:0005654	nucleoplasm	ATP6V1D	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	ATP6V1D	IDA		Human	GO_REF:0000052
Cellular Component	GO:0033176	proton-transporting V-type ATPase complex	ATP6V1D	IDA		Human	PMID:18752060
Cellular Component	GO:0033176	proton-transporting V-type ATPase complex	Atp6v1d	IDA		Mouse	PMID:12527205
Cellular Component	GO:1902495	transmembrane transporter complex	Atp6v1d	IDA		Mouse	PMID:12527205
Biological Process	GO:0060271	cilium assembly	ATP6V1D	IMP		Human	PMID:21844891
Biological Process	GO:0061512	protein localization to cilium	ATP6V1D	IMP		Human	PMID:21844891
Biological Process	GO:0097401	synaptic vesicle lumen acidification	Atp6v1d	IDA		Mouse	PMID:28793259
Biological Process	GO:0097401	synaptic vesicle lumen acidification	Atp6v1d	IMP		Mouse	PMID:28793259
Biological Process	GO:0097401	synaptic vesicle lumen acidification	Atp6v1d	EXP		Mouse	PMID:28793259

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern