Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ARID1B
  • Mouse genes Arid1b
  • Rat genes Arid1b
  • Zfish genes arid1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Arid1b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	ARID1B	IPI	UniProtKB:P51531	Human	PMID:12200431
Molecular Function	GO:0005515	protein binding	ARID1B	IPI	UniProtKB:P51532	Human	PMID:12200431
Molecular Function	GO:0005515	protein binding	Arid1b	IPI	UniProtKB:Q3TKT4	Mouse	MGI:MGI:5499063|PMID:23698369
Molecular Function	GO:0005515	protein binding	Arid1b	IPI	UniProtKB:Q3TKT4	Mouse	MGI:MGI:5491971|PMID:23540691
Molecular Function	GO:0005515	protein binding	Arid1b	IPI	PR:P70377-1	Mouse	PMID:34010636
Cellular Component	GO:0005737	cytoplasm	Arid1b	IDA		Rat	PMID:14633620|RGD:1302474
Cellular Component	GO:0005829	cytosol	ARID1B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0071565	nBAF complex	Arid1b	IDA		Mouse	PMID:23785148
Cellular Component	GO:0005654	nucleoplasm	ARID1B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Arid1b	IDA		Mouse	PMID:26937011
Cellular Component	GO:0005634	nucleus	Arid1b	IDA		Rat	PMID:14633620|RGD:1302474
Cellular Component	GO:0005886	plasma membrane	ARID1B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016514	SWI/SNF complex	ARID1B	IDA		Human	PMID:11734557
Cellular Component	GO:0070603	SWI/SNF superfamily-type complex	Arid1b	IDA		Mouse	PMID:24335282
Biological Process	GO:1904385	cellular response to angiotensin	Arid1b	IEP		Rat	PMID:14633620|RGD:1302474
Biological Process	GO:0097026	dendritic cell dendrite assembly	Arid1b	IMP		Mouse	PMID:26937011
Biological Process	GO:0060996	dendritic spine development	Arid1b	IMP		Mouse	PMID:26937011
Biological Process	GO:0007270	neuron-neuron synaptic transmission	Arid1b	IMP		Mouse	PMID:26937011
Biological Process	GO:0002931	response to ischemia	Arid1b	IEP		Rat	PMID:14633620|RGD:1302474

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern