Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ANKRD42
  • Mouse genes Ankrd42
  • Rat genes Ankrd42
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ankrd42

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0051059	NF-kappaB binding	Ankrd42	IPI	PR:P25799	Mouse	PMID:20547855
Molecular Function	GO:0005515	protein binding	Ankrd42	IPI	UniProtKB:P25799:PRO_0000030313	Mouse	MGI:MGI:4458950|PMID:20547855
Cellular Component	GO:0005634	nucleus	Ankrd42	IDA		Mouse	PMID:20547855
Biological Process	GO:1900017	positive regulation of cytokine production involved in inflammatory response	Ankrd42	IMP		Mouse	PMID:20547855
Biological Process	GO:0051091	positive regulation of DNA-binding transcription factor activity	Ankrd42	IMP		Mouse	PMID:20547855
Biological Process	GO:0051092	positive regulation of NF-kappaB transcription factor activity	Ankrd42	IMP		Mouse	PMID:20547855

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern