Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes AMTN
  • Mouse genes Amtn
  • Rat genes Amtn
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Amtn

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	AMTN	IPI	UniProtKB:Q8IXL6	Human	PMID:25789606
Molecular Function	GO:0005515	protein binding	AMTN	IPI	UniProtKB:P46379-2	Human	PMID:32296183
Cellular Component	GO:0005604	basement membrane	Amtn	IDA		Mouse	MGI:MGI:3696589|PMID:16787391
Cellular Component	GO:0005604	basement membrane	Amtn	IDA		Rat	PMID:16787391|RGD:2304068
Cellular Component	GO:0005911	cell-cell junction	Amtn	IDA		Mouse	MGI:MGI:3696589|PMID:16787391
Cellular Component	GO:0005911	cell-cell junction	Amtn	IDA		Rat	PMID:16787391|RGD:2304068
Cellular Component	GO:0031012	extracellular matrix	Amtn	IMP		Mouse	MGI:MGI:3617591|PMID:16304441
Cellular Component	GO:0031012	extracellular matrix	Amtn	IDA		Rat	PMID:16787391|RGD:2304068
Biological Process	GO:0042475	odontogenesis of dentin-containing tooth	Amtn	IEP		Mouse	MGI:MGI:3617591|PMID:16304441
Biological Process	GO:0042475	odontogenesis of dentin-containing tooth	Amtn	IEP		Rat	PMID:16674676|RGD:8554564
Biological Process	GO:0042475	odontogenesis of dentin-containing tooth	Amtn	IEP		Rat	PMID:16787391|RGD:2304068
Biological Process	GO:0070169	positive regulation of biomineral tissue development	AMTN	IDA		Human	PMID:25407797
Biological Process	GO:0070175	positive regulation of enamel mineralization	Amtn	IMP		Mouse	MGI:MGI:5613837|PMID:25407797

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern