Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ACTL6B
  • Mouse genes Actl6b
  • Rat genes Actl6b
  • Zfish genes actl6b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Actl6b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Actl6b	IPI	PR:Q3TKT4	Mouse	PMID:12368262
Molecular Function	GO:0005515	protein binding	Actl6b	IPI	PR:Q6DIC0	Mouse	PMID:12368262
Molecular Function	GO:0005515	protein binding	Actl6b	IPI	PR:Q6DIC0	Mouse	PMID:12437990
Cellular Component	GO:0071565	nBAF complex	Actl6b	IDA		Mouse	MGI:MGI:3775125|PMID:17640523
Cellular Component	GO:0071565	nBAF complex	Actl6b	IDA		Mouse	PMID:23785148
Cellular Component	GO:0005634	nucleus	ACTL6B	IDA		Human	PMID:10380635
Cellular Component	GO:0005634	nucleus	Actl6b	IDA		Rat	PMID:12368262|RGD:10047140
Cellular Component	GO:0016514	SWI/SNF complex	ACTL6B	IDA		Human	PMID:8804307
Cellular Component	GO:0016514	SWI/SNF complex	Actl6b	IDA		Mouse	PMID:12437990
Cellular Component	GO:0070603	SWI/SNF superfamily-type complex	Actl6b	IDA		Mouse	PMID:24335282
Cellular Component	GO:0070603	SWI/SNF superfamily-type complex	Actl6b	IDA		Mouse	PMID:12368262
Biological Process	GO:0006338	chromatin remodeling	ACTL6B	IDA		Human	PMID:11726552
Biological Process	GO:0016358	dendrite development	ACTL6B	IMP		Human	PMID:31031012
Biological Process	GO:0007399	nervous system development	Actl6b	IMP		Mouse	MGI:MGI:3775136|PMID:17920018
Biological Process	GO:0007399	nervous system development	Actl6b	IMP		Mouse	MGI:MGI:3775125|PMID:17640523
Biological Process	GO:0042551	neuron maturation	ACTL6B	IMP		Human	PMID:31031012
Biological Process	GO:0021510	spinal cord development	Actl6b	IEP		Rat	PMID:23677776|RGD:9587760

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern