Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ABO
  • Mouse genes Abo
  • Rat genes Abo,Abo2,Abo3
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Abo

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001962	alpha-1,3-galactosyltransferase activity	Abo	IDA		Rat	PMID:12626403|RGD:632674
Molecular Function	GO:0003823	antigen binding	ABO	IMP		Human	PMID:12198488
Molecular Function	GO:0004381	fucosylgalactoside 3-alpha-galactosyltransferase activity	Abo	IDA		Mouse	PMID:11278752
Molecular Function	GO:0004380	glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase activity	Abo	IDA		Mouse	PMID:11278752
Molecular Function	GO:0004380	glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase activity	Abo	IDA		Rat	PMID:11842091|RGD:625392
Molecular Function	GO:0004380	glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase activity	Abo3	IDA		Rat	PMID:11842091|RGD:625392
Molecular Function	GO:0030145	manganese ion binding	ABO	IMP		Human	PMID:12198488
Molecular Function	GO:0000166	nucleotide binding	ABO	IMP		Human	PMID:12198488
Cellular Component	GO:0031410	cytoplasmic vesicle	Abo	IDA		Rat	PMID:17206613|RGD:2307253
Cellular Component	GO:0005794	Golgi apparatus	Abo	IDA		Rat	PMID:17206613|RGD:2307253
Biological Process	GO:0042742	defense response to bacterium	Abo3	IEP		Rat	PMID:11842091|RGD:625392
Biological Process	GO:0043066	negative regulation of apoptotic process	Abo	IMP		Rat	PMID:12499407|RGD:2315741
Biological Process	GO:0009312	oligosaccharide biosynthetic process	Abo	IDA		Mouse	PMID:11278752
Biological Process	GO:0008284	positive regulation of cell population proliferation	Abo	IMP		Rat	PMID:12499407|RGD:2315741
Biological Process	GO:0009624	response to nematode	Abo	IEP		Rat	PMID:11842091|RGD:625392
Biological Process	GO:0032526	response to retinoic acid	Abo	IEP		Rat	PMID:15042712|RGD:1600915

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern