Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ABITRAM
  • Mouse genes Abitram
  • Rat genes Abitram
  • Zfish genes abitram
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Abitram

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0051015	actin filament binding	Abitram	IDA		Mouse	MGI:MGI:5632379|PMID:24782708
Molecular Function	GO:0003785	actin monomer binding	Abitram	IDA		Mouse	MGI:MGI:5632379|PMID:24782708
Molecular Function	GO:0005515	protein binding	ABITRAM	IPI	UniProtKB:P27958:PRO_0000037576	Human	PMID:15607035
Molecular Function	GO:0005515	protein binding	ABITRAM	IPI	UniProtKB:Q6NT76	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ABITRAM	IPI	UniProtKB:Q3MIT2	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	ABITRAM	IPI	UniProtKB:Q14696	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ABITRAM	IPI	UniProtKB:Q3MIT2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ABITRAM	IPI	UniProtKB:Q6NT76	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ABITRAM	IPI	UniProtKB:Q8IY42	Human	PMID:32296183
Cellular Component	GO:0030425	dendrite	Abitram	IDA		Mouse	PMID:24349419
Cellular Component	GO:0032433	filopodium tip	Abitram	IDA		Mouse	MGI:MGI:5632379|PMID:24782708
Cellular Component	GO:0030426	growth cone	Abitram	IDA		Mouse	MGI:MGI:5632379|PMID:24782708
Cellular Component	GO:0030027	lamellipodium	Abitram	IDA		Mouse	MGI:MGI:5632379|PMID:24782708
Cellular Component	GO:0016607	nuclear speck	Abitram	IDA		Mouse	PMID:24349419
Cellular Component	GO:0016607	nuclear speck	Abitram	IDA		Mouse	PMID:26013685
Cellular Component	GO:0005634	nucleus	Abitram	IDA		Mouse	MGI:MGI:5632379|PMID:24782708
Cellular Component	GO:0005634	nucleus	Abitram	IDA		Mouse	PMID:24349419
Cellular Component	GO:0005634	nucleus	Abitram	IDA		Mouse	PMID:26013685
Biological Process	GO:0048813	dendrite morphogenesis	Abitram	IMP		Mouse	MGI:MGI:5632379|PMID:24782708
Biological Process	GO:0030833	regulation of actin filament polymerization	Abitram	IMP		Mouse	MGI:MGI:5632379|PMID:24782708
Biological Process	GO:0051489	regulation of filopodium assembly	Abitram	IMP		Mouse	MGI:MGI:5632379|PMID:24782708

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern