Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes C14orf39
  • Mouse genes 4930447C04Rik
  • Rat genes Six6os1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set 4930447C04Rik

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0000801	central element	4930447C04Rik	IDA		Mouse	MGI:MGI:5822939|PMID:27796301
Cellular Component	GO:0005694	chromosome	4930447C04Rik	IDA		Mouse	MGI:MGI:6478065|PMID:30746471
Cellular Component	GO:0005694	chromosome	4930447C04Rik	IDA		Mouse	MGI:MGI:6272683|PMID:30272023
Biological Process	GO:0007129	homologous chromosome pairing at meiosis	4930447C04Rik	IMP		Mouse	MGI:MGI:5822939|PMID:27796301
Biological Process	GO:0007129	homologous chromosome pairing at meiosis	4930447C04Rik	IMP		Mouse	MGI:MGI:6716491|PMID:33508233
Biological Process	GO:0051321	meiotic cell cycle	4930447C04Rik	IMP		Mouse	MGI:MGI:6716491|PMID:33508233
Biological Process	GO:0010705	meiotic DNA double-strand break processing involved in reciprocal meiotic recombination	4930447C04Rik	IMP		Mouse	MGI:MGI:5822939|PMID:27796301
Biological Process	GO:0048477	oogenesis	4930447C04Rik	IMP		Mouse	MGI:MGI:5822939|PMID:27796301
Biological Process	GO:0048477	oogenesis	4930447C04Rik	IMP		Mouse	MGI:MGI:6716491|PMID:33508233
Biological Process	GO:0007283	spermatogenesis	4930447C04Rik	IMP		Mouse	MGI:MGI:5822939|PMID:27796301
Biological Process	GO:0007283	spermatogenesis	4930447C04Rik	IMP		Mouse	MGI:MGI:6716491|PMID:33508233
Biological Process	GO:0007130	synaptonemal complex assembly	4930447C04Rik	IMP		Mouse	MGI:MGI:6716491|PMID:33508233

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern