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Gene Expression Data
Assay Details
Assay
Reference: J:124892 Flames N, et al., Delineation of multiple subpallial progenitor domains by the combinatorial expression of transcriptional codes. J Neurosci. 2007 Sep 5;27(36):9682-95
Assay type: RNA in situ
MGI Accession ID: MGI:7865772
Gene symbol: Nkx6-2
Gene name: NK6 homeobox 2
Probe: pQ444-13
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 2F/J: embryonic day 13.5 (more )
Note: rostral subpallium
Structure Level Pattern Image Note
TS21: lateral ganglionic eminence Weak Regionally restricted 2F , 2J Expressed around the lateral and medial ganglionic eminence boundary. Weak expression in pLGE4.
TS21: medial ganglionic eminence Strong Regionally restricted 2F , 2J Expressed around the lateral and medial ganglionic eminence boundary. Strong expression in pMGE1. Low expression in pMGE2.
Specimen 3F: embryonic day 13.5 (more )
Note: rostral-intermediate subpallium
Structure Level Pattern Image Note
TS21: lateral ganglionic eminence Present Regionally restricted 3F Expressed in the caudal pole of pLGE4.
TS21: medial ganglionic eminence Present Regionally restricted 3F Expressed in pMGE1.
TS21: preoptic area Present Regionally restricted 3F Expressed in the ventral part (pPOA2).
Specimen 4C: embryonic day 13.5 (more )
Note: caudal-intermediate subpallium
Structure Level Pattern Image Note
TS21: lateral ganglionic eminence Present Regionally restricted 4C Not expressed in the telencephalon at this level.
TS21: medial ganglionic eminence Present Regionally restricted 4C Not expressed in the telencephalon at this level.
TS21: preoptic area Present Regionally restricted 4C Not expressed in the telencephalon at this level.
Specimen 6F: embryonic day 13.5 (more )
Note: subpallial septum
Structure Level Pattern Image Note
TS21: lateral ganglionic eminence Present Regionally restricted 6F Expressed around the lateral and medial ganglionic eminence boundary.
TS21: medial ganglionic eminence Present Regionally restricted 6F Expressed around the lateral and medial ganglionic eminence boundary.
TS21: telencephalon Present Regionally restricted 6F Expressed in a small septal domain (pSe4).
Specimen S1D: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: telencephalon Strong Regionally restricted S1D Expressed at high levels in the dorsal part of the medial ganglionic eminence (pMGE1), and at lower levels in the pLGE4 and pMGE2.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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10/06/2026
MGI 6.29 		The Jackson Laboratory