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Gene Expression Data
Assay Details
Assay
Reference: J:154889 Deschamps C, et al., Expression of ephrinA5 during development and potential involvement in the guidance of the mesostriatal pathway. Exp Neurol. 2009 Oct;219(2):466-80
Assay type: RNA in situ
MGI Accession ID: MGI:7714978
Gene symbol: Efna5
Gene name: ephrin A5
Probe: ephrinA5 cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 4a: embryonic day 12.5 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS20: midbrain Strong Regionally restricted 4a Mainly expressed in the ventral mesencephalon dorsally to the TH+ somas.
TS20: brainstem nucleus Strong Regionally restricted 4a Expressed in the red nucleus.
Specimen 4b: embryonic day 12.5 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS20: thalamus Present 4b
Specimen 4c: embryonic day 12.5 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS20: corpus striatum Present Graded 4c A ventro-dorsal expression gradient was seen.
Specimen 4d: embryonic day 14.5 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS22: red nucleus Strong 4d inset , 4d Mainly expressed in the ventral mesencephalon dorsally to the TH+ somas.
Specimen 4e: embryonic day 14.5 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS22: thalamus Present 4e
Specimen 4f: embryonic day 14.5 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS22: corpus striatum Present Graded 4f A dorso-ventral expression gradient was seen.
Specimen 4g: embryonic day 16.5 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS24: red nucleus Strong 4g Mainly expressed in the ventral mesencephalon dorsally to the TH+ somas.
Specimen 4h: embryonic day 16.5 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS24: thalamus Present 4h
Specimen 4i: embryonic day 16.5 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS24: corpus striatum Present Regionally restricted 4i Expression was more concentrated in the caudal part.
Specimen 4j: embryonic day 18.5 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS26: red nucleus Strong 4j Mainly expressed in the ventral mesencephalon dorsally to the TH+ somas.
Specimen 4k: embryonic day 18.5 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS26: thalamus Present 4k
Specimen 4l: embryonic day 18.5 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS26: corpus striatum Present Regionally restricted 4l Expression was more concentrated in the dorsal part.
Specimen 5a: postnatal day 0 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS27: red nucleus Present 5a Mainly expressed in the ventral mesencephalon dorsally to the TH+ somas.
Specimen 5b: postnatal day 0 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS27: thalamus Present 5b
Specimen 5c: postnatal day 0 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS27: corpus striatum Present 5c
Specimen 5d: postnatal day 7 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS28: red nucleus Present 5d Expression was diminished at P7.
Specimen 5e: postnatal day 7 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS28: thalamus Present 5e Weaker expression at P7.
Specimen 5f: postnatal day 7 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS28: corpus striatum Present 5f Decreased expression at P7.
Specimen 5g: postnatal month 4 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS28: red nucleus Absent 5g No expression in the adult.
Specimen 5h: postnatal month 4 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS28: thalamus Absent 5h Expression was not detected in the adult.
Specimen 5i: postnatal month 4 (more )
Note: Double labeled: blue - Efna5; brown - Th (assay MGI:7714977).
Structure Level Pattern Image Note
TS28: corpus striatum Absent 5i Expression was not detected in the adult.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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12/30/2025
MGI 6.24 		The Jackson Laboratory