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Gene Expression Data
Assay Details
Assay
Reference: J:79481 Yu J, et al., Sonic hedgehog regulates proliferation and differentiation of mesenchymal cells in the mouse metanephric kidney. Development. 2002 Nov;129(22):5301-12
Assay type: RNA in situ
MGI Accession ID: MGI:7414045
Gene symbol: Ptch1
Gene name: patched 1
Probe: Ptch probe10
Probe preparation: labelled with S35
Results
Specimen 1C: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: mesenchyme of metanephros Strong Regionally restricted 1C High levels of expression in most layers of mesenchymal cells adjacent to epithelium of collecting ducts and ureter.
TS22: ureteral mesenchyme Strong Regionally restricted 1C High levels of expression in most layers of mesenchymal cells adjacent to epithelium of collecting ducts and ureter.

Specimen 1G: postnatal newborn (more )
Structure Level Pattern Image Note
TS27: renal medulla Present Regionally restricted 1G inset , 1G Expression in mesenchyme of medulla and renal pelvis.
TS27: renal pelvis Present Regionally restricted 1G inset , 1G Expression in mesenchyme of medulla and renal pelvis.

Specimen 1K: postnatal newborn (more )
Structure Cell Type Level Pattern Image Note
TS27: ureter Present Regionally restricted 1K Expression restricted to think layer of mesenchymal cells immediately adjacent to epithelium.
TS27: ureteral smooth muscle layer smooth muscle component ureter smooth muscle cell Absent 1K No expression in differentiated ureter smooth muscle cells.

Specimen 4A: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: metanephros Present 4A

Specimen 4B: embryonic day 14.5; Shhtm1Amc/Shhtm2Amc, Tg(Hoxb7-cre)13Amc/0 (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS22: metanephros Absent 4B Expression reduced to basal levels.

Specimen 4C: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: ureter Present 4C

Specimen 4D: embryonic day 14.5; Shhtm1Amc/Shhtm2Amc, Tg(Hoxb7-cre)13Amc/0 (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS22: ureter Absent 4D Expression reduced to basal levels.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/30/2025
MGI 6.24
The Jackson Laboratory