Gene Expression Data
Assay Details
Assay
|
Reference:
|
J:276894
Dora E, et al., Loss of Pax6 Causes Regional Changes in Dll1 Expression in Developing Cerebral Cortex. Front Cell Neurosci. 2019;13:78
|
Assay type:
|
RNA in situ
|
MGI Accession ID:
|
MGI:7335043
|
Gene symbol:
|
Dll1
|
Gene name:
|
delta like canonical Notch ligand 1
|
Probe:
|
Dll1 probe32
|
Probe preparation:
|
Antisense labelled with digoxigenin RNA
|
Visualized with:
|
Alkaline phosphatase
|
Assay notes:
|
Authors state that non-homozygous littermates were used as controls.
|
|
Results
|
Specimen
1A:
embryonic day 11.5; Pax6Sey/Pax6 +
(more )
Note: The genetic background of the specimen was either wildtype or heterozygous.
Specimen
1A:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6+
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
The genetic background of the specimen was either wildtype or heterozygous.
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: telencephalon |
Present |
Non-Uniform |
1A
|
Expression in salt and pepper fashion throughout telencephalic tissue.
|
Specimen
1B:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6Sey
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: telencephalon |
Present |
Non-Uniform |
1B
|
Salt and pepper pattern of expression similar to controls.
|
Specimen
1C:
embryonic day 11.5; Pax6Sey/Pax6 +
(more )
Note: The genetic background of the specimen was either wildtype or heterozygous.
Specimen
1C:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6+
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
The genetic background of the specimen was either wildtype or heterozygous.
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: telencephalon |
Present |
Non-Uniform |
1C
|
Expression in salt and pepper fashion throughout telencephalic tissue.
|
Specimen
1D:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6Sey
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: telencephalon |
Weak |
Non-Uniform |
1D
|
Salt and pepper pattern of expression similar to controls. Lower density of expressing cells compared to controls.
|
Specimen
1E:
embryonic day 12.5; Pax6Sey/Pax6 +
(more )
Note: The genetic background of the specimen was either wildtype or heterozygous.
Specimen
1E:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6+
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
The genetic background of the specimen was either wildtype or heterozygous.
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: telencephalon |
Present |
Non-Uniform |
1E
|
Expression in salt and pepper fashion throughout telencephalic tissue.
|
Specimen
1F:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6Sey
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: telencephalon |
Present |
Non-Uniform |
1F
|
Salt and pepper pattern of expression similar to controls.
|
Specimen
1G:
embryonic day 12.5; Pax6Sey/Pax6 +
(more )
Note: The genetic background of the specimen was either wildtype or heterozygous.
Specimen
1G:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6+
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
The genetic background of the specimen was either wildtype or heterozygous.
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: cerebral cortex |
Present |
Non-Uniform |
1G
|
Expression in salt and pepper fashion.
|
Specimen
1H:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6Sey
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: cerebral cortex |
Weak |
Non-Uniform |
1H
|
Salt and pepper pattern of expression similar to controls. Lower density of expressing cells compared to controls.
|
Specimen
1I:
embryonic day 12.5; Pax6Sey/Pax6 +
(more )
Note: The genetic background of the specimen was either wildtype or heterozygous.
Specimen
1I:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6+
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
The genetic background of the specimen was either wildtype or heterozygous.
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: telencephalon |
Present |
Non-Uniform |
1I
|
Expression in salt and pepper fashion throughout telencephalic tissue.
|
Specimen
1J:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6Sey
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: telencephalon |
Present |
Non-Uniform |
1J
|
Salt and pepper pattern of expression similar to controls.
|
Specimen
1K:
embryonic day 12.5; Pax6Sey/Pax6 +
(more )
Note: The genetic background of the specimen was either wildtype or heterozygous.
Specimen
1K:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6+
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
The genetic background of the specimen was either wildtype or heterozygous.
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: cerebral cortex |
Present |
Non-Uniform |
1K
|
Expression in salt and pepper fashion.
|
Specimen
1L:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6Sey
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: cerebral cortex |
Weak |
Non-Uniform |
1L
|
Salt and pepper pattern of expression similar to controls. Lower density of expressing cells compared to controls.
|
Specimen
1M:
embryonic day 12.5; Pax6Sey/Pax6 +
(more )
Note: The genetic background of the specimen was either wildtype or heterozygous.
Specimen
1M:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6+
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
The genetic background of the specimen was either wildtype or heterozygous.
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: telencephalon |
Present |
Non-Uniform |
1M
|
Expression in salt and pepper fashion throughout telencephalic tissue.
|
Specimen
1N:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6Sey
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: telencephalon |
Present |
Non-Uniform |
1N
|
Salt and pepper pattern of expression similar to controls.
|
Specimen
1O:
embryonic day 12.5; Pax6Sey/Pax6 +
(more )
Note: The genetic background of the specimen was either wildtype or heterozygous.
Specimen
1O:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6+
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
The genetic background of the specimen was either wildtype or heterozygous.
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: cerebral cortex |
Present |
Non-Uniform |
1O
|
Expression in salt and pepper fashion.
|
Specimen
1P:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6Sey
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: cerebral cortex |
Weak |
Non-Uniform |
1P
|
Salt and pepper pattern of expression similar to controls. Lower density of expressing cells compared to controls.
|
Specimen
1Q:
embryonic day 13.5; Pax6Sey/Pax6 +
(more )
Note: The genetic background of the specimen was either wildtype or heterozygous.
Specimen
1Q:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6+
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
The genetic background of the specimen was either wildtype or heterozygous.
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: telencephalon |
Present |
Non-Uniform |
1Q
|
Expression in salt and pepper fashion throughout telencephalic tissue.
|
Specimen
1R:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6Sey
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: telencephalon |
Present |
Non-Uniform |
1R
|
Salt and pepper pattern of expression similar to controls.
|
Specimen
1S:
embryonic day 13.5; Pax6Sey/Pax6 +
(more )
Note: The genetic background of the specimen was either wildtype or heterozygous.
Specimen
1S:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6+
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
The genetic background of the specimen was either wildtype or heterozygous.
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: cerebral cortex |
Present |
Non-Uniform |
1S
|
Expression in salt and pepper fashion.
|
Specimen
1T:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Pax6Sey/Pax6Sey
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: cerebral cortex |
Present |
Non-Uniform |
1T
|
Salt and pepper pattern of expression similar to controls.
|
Specimen
8A:
embryonic day 14.5
(more )
Specimen
8A:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: telencephalon |
Present |
Non-Uniform |
8A
|
Salt and pepper pattern of expression.
|
Specimen
8B:
(close )
Structure |
Level |
Pattern |
Image |
Note |
TS22: telencephalon |
Present |
Non-Uniform |
8B
|
Expression very similar to control embryos.
|
Specimen
8C:
embryonic day 14.5
(more )
Specimen
8C:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: cerebral cortex |
Present |
Non-Uniform |
8C
|
Salt and pepper pattern of expression.
|
Specimen
8D:
(close )
Structure |
Level |
Pattern |
Image |
Note |
TS22: cerebral cortex |
Present |
Non-Uniform |
8D
|
Expression very similar to control embryos.
|
Specimen
8E:
embryonic day 14.5
(more )
Specimen
8E:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: telencephalon |
Present |
Non-Uniform |
8E
|
Salt and pepper pattern of expression.
|
Specimen
8F:
(close )
Structure |
Level |
Pattern |
Image |
Note |
TS22: telencephalon |
Present |
Non-Uniform |
8F
|
Expression very similar to control embryos.
|
Specimen
8G:
embryonic day 14.5
(more )
Specimen
8G:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: cerebral cortex |
Present |
Non-Uniform |
8G
|
Salt and pepper pattern of expression.
|
Specimen
8H:
(close )
Structure |
Level |
Pattern |
Image |
Note |
TS22: cerebral cortex |
Present |
Non-Uniform |
8H
|
Expression very similar to control embryos.
|
Specimen
8I:
embryonic day 14.5
(more )
Specimen
8I:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: telencephalon |
Present |
Non-Uniform |
8I
|
Salt and pepper pattern of expression.
|
Specimen
8J:
(close )
Structure |
Level |
Pattern |
Image |
Note |
TS22: telencephalon |
Present |
Non-Uniform |
8J
|
Expression very similar to control embryos.
|
Specimen
8K:
embryonic day 14.5
(more )
Specimen
8K:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: cerebral cortex |
Present |
Non-Uniform |
8K
|
Salt and pepper pattern of expression.
|
Specimen
8L:
(close )
Structure |
Level |
Pattern |
Image |
Note |
TS22: cerebral cortex |
Present |
Non-Uniform |
8L
|
Expression very similar to control embryos.
|
|