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Gene Expression Data
Assay Details
Assay
Reference: J:312000 Bell BJ, et al., A clock-driven neural network critical for arousal. bioRxiv. 2020;
Assay type: RNA in situ
MGI Accession ID: MGI:6784062
Gene symbol: Ankfn1
Gene name: ankyrin-repeat and fibronectin type III domain containing 1
Probe: Mm-Ankfn1 probe1
Probe preparation: Antisense
Visualized with: Chromogenic
Assay notes: RNAscope assay.
Results
Specimen 1a: postnatal month 2-4 (more )
Structure Level Pattern Image Note
TS28: suprachiasmatic nucleus Present Regionally restricted 1a Expression is seen in the core.
Specimen 1d +/+: postnatal month 2-4 (more )
Structure Level Pattern Image Note
TS28: suprachiasmatic nucleus Present 1d +/+
Specimen 1d -/-: postnatal month 2-4; Ankfn1em1Mnw/Ankfn1em1Mnw (more )
Structure Level Pattern Image Note
TS28: suprachiasmatic nucleus Weak 1d -/- Expression is markedly reduced in the mutant.
Specimen 2a: postnatal month 2-4 (more )
Structure Level Pattern Image Note
TS28: dorsomedial hypothalamic nucleus Present 2a
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory