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Gene Expression Data
Assay Details
Assay
Reference: J:48317 Kuhlbrodt K, et al., Cooperative function of POU proteins and SOX proteins in glial cells. J Biol Chem. 1998 Jun 26;273(26):16050-7
Assay type: RNA in situ
MGI Accession ID: MGI:6477004
Gene symbol: Sox11
Gene name: SRY (sex determining region Y)-box 11
Probe: Sox11 cDNA4
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 2A: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: neural plate Present Regionally restricted 2A Expressed most prominently in the neuroepithelium of the rostral region.
TS13: somite Present 2A
TS13: heart Absent 2A
TS13: embryo Present Regionally restricted 2A Expressed over the whole embryo with the exception of the heart.

Specimen 2B: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural plate Present 2B
TS15: somite Present 2B
TS15: 1st branchial arch Strong 2B
TS15: 2nd branchial arch Strong 2B
TS15: eye Strong 2B
TS15: otocyst Strong 2B

Specimen 2C: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: brain Present Widespread 2C
TS17: future spinal cord Present Widespread 2C
TS17: branchial arch Present 2C
TS17: forelimb bud Present 2C
TS17: hindlimb bud Present 2C
TS17: otocyst Present 2C
TS17: somite Present 2C
TS17: head mesenchyme Present Regionally restricted 2C Expressed in large parts of the facial cranial mesoderm.
TS17: dorsal root ganglion Present 2C Relatively low levels when compared with the central nervous system.
TS17: eye Present 2C Weaker expression.

Specimen 2D: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: brain Present 2D
TS19: branchial arch Present 2D
TS19: forelimb bud Present 2D
TS19: future spinal cord Present 2D
TS19: hindlimb bud Present 2D
TS19: otocyst Present 2D
TS19: somite Present 2D
TS19: face Present Regionally restricted 2D Expressed in large parts of the facial cranial mesoderm.
TS19: cranial ganglion Present 2D Relatively low levels when compared with the central nervous system.
TS19: eye Present 2D Weaker expression.

Specimen 2E: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: brain Present 2E
TS21: face mesenchyme Present 2E
TS21: forelimb digit mesenchyme Present 2E
TS21: hindlimb digit mesenchyme Present 2E
TS21: inner ear Present 2E
TS21: somite Present 2E
TS21: spinal cord Present 2E
TS21: early nephron Moderate 2E
TS21: eye Present 2E Weaker expression.
TS21: tooth Present 2E Weaker expression.

Specimen 2F: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: forebrain Strong 2F
TS22: brainstem nucleus Strong Regionally restricted 2F Expressed in the inferior olive, the superior olive, and the pontine nuclei.
TS22: spinal cord Present 2F Decreased expression.
TS22: dorsal root ganglion Present 2F Relatively low levels when compared with the central nervous system.
TS22: eye Present 2F Weaker expression.
TS22: tooth Present 2F Weaker expression.

Specimen 2G: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: hippocampal formation Present 2G
TS24: hypothalamic nucleus Present 2G
TS24: inferior colliculus Present 2G
TS24: retina Present 2G
TS24: cerebellum external granule cell layer Present 2G Exhibited stronger expression than the surrounding nervous tissue.
TS24: deep cerebellar nucleus Present 2G Exhibited stronger expression than the surrounding nervous tissue.
TS24: geniculate thalamic group Present Regionally restricted 2G Expressed in the median geniculate nucleus.
TS24: cerebral cortex subventricular zone Strong 2G
TS24: cerebral cortex ventricular layer Strong 2G
TS24: cortical plate Strong 2G
TS24: nasal epithelium Strong 2G
TS24: cerebral cortex intermediate zone Weak 2G
TS24: limb Absent 2G
TS24: eye Present 2G Weaker expression.
TS24: tooth Present 2G Weaker expression.

Specimen 2H: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: inferior colliculus Present 2H Increased expression.
TS26: telencephalon Present 2H Increased expression.
TS26: cerebellum external granule cell layer Present 2H
TS26: brainstem nucleus Present Regionally restricted 2H Expressed in the nuclei of the auditory pathway.
TS26: glomerular tuft Trace 2H Slightly above background.
TS26: nasal epithelium Strong 2H
TS26: eye Present 2H Weaker expression.
TS26: tooth Present 2H Weaker expression.

Specimen not shown: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: embryo Weak

Specimen not shown: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube Present Widespread Expressed in both the caudal and rostal with uniform distribution throughout the neuroepithelium.


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory