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Gene Expression Data
Assay Details
Assay
Reference: J:286312 Pook C, et al., Expression pattern of Nav2 in the murine CNS with development. Gene Expr Patterns. 2020 Jan;35:119099
Assay type: RNA in situ
MGI Accession ID: MGI:6405035
Gene symbol: Nav2
Gene name: neuron navigator 2
Probe: 5'Nav2
Probe preparation: Antisense labelled with horseradish peroxidase RNA
Results
Specimen 2 E17.5 WT: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: cerebellum granule cell layer Present 2_E17.5 WT 5'Nav2
TS25: cerebral cortex Present 2_E17.5 WT 5'Nav2
TS25: hippocampus Present 2_E17.5 WT 5'Nav2
TS25: main olfactory bulb Present 2_E17.5 WT 5'Nav2
TS25: thalamus Present 2_E17.5 WT 5'Nav2
TS25: brain Present Non-Uniform 2_E17.5 WT 5'Nav2 Lighter staining was noted throughout many regions of the brain.
TS25: brain white matter Absent 2_E17.5 WT 5'Nav2
TS25: caudate-putamen Absent 2_E17.5 WT 5'Nav2

Specimen 2 E17.5 Hyp: embryonic day 17.5; Nav2Gt(OST125046)Lex/Nav2Gt(OST125046)Lex (more )
Structure Level Pattern Image Note
TS25: brain Trace 2_E17.5 Hyp 5'Nav2 A near absence of staining was observed.

Specimen 2 P0 WT: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: cerebellum granule cell layer Present 2_P0 WT 5'Nav2 Expression peaked around birth.
TS27: cerebral cortex Present 2_P0 WT 5'Nav2 Expression peaked around birth.
TS27: hippocampus Present 2_P0 WT 5'Nav2 Expression peaked around birth.
TS27: main olfactory bulb Present 2_P0 WT 5'Nav2 Expression peaked around birth.
TS27: thalamus Present 2_P0 WT 5'Nav2 Expression peaked around birth.
TS27: brain Present Non-Uniform 2_P0 WT 5'Nav2 Lighter staining was noted throughout many regions of the brain.
TS27: brain white matter Absent 2_P0 WT 5'Nav2
TS27: caudate-putamen Absent 2_P0 WT 5'Nav2

Specimen 2 P0 Hyp: postnatal day 0; Nav2Gt(OST125046)Lex/Nav2Gt(OST125046)Lex (more )
Structure Level Pattern Image Note
TS27: brain Trace 2_P0 Hyp 5'Nav2 A near absence of staining was observed.

Specimen 2 P7 WT: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: cerebellum granule cell layer Present 2_P7 WT 5'Nav2
TS28: cerebral cortex Present 2_P7 WT 5'Nav2
TS28: hippocampus Present 2_P7 WT 5'Nav2
TS28: main olfactory bulb Present 2_P7 WT 5'Nav2
TS28: thalamus Present 2_P7 WT 5'Nav2
TS28: brain Present Non-Uniform 2_P7 WT 5'Nav2 Lighter staining was noted throughout many regions of the brain.
TS28: brain white matter Absent 2_P7 WT 5'Nav2
TS28: caudate-putamen Absent 2_P7 WT 5'Nav2

Specimen 2 P7 Hyp: postnatal day 7; Nav2Gt(OST125046)Lex/Nav2Gt(OST125046)Lex (more )
Structure Level Pattern Image Note
TS28: brain Trace 2_P7 Hyp 5'Nav2 A near absence of staining was observed.

Specimen 2 P17 WT: postnatal day 17 (more )
Structure Level Pattern Image Note
TS28: brain Weak 2_P17 WT 5'Nav2
TS28: cerebral cortex Weak 2_P17 WT 5'Nav2
TS28: thalamus Weak 2_P17 WT 5'Nav2

Specimen 2 P17 Hyp: postnatal day 17; Nav2Gt(OST125046)Lex/Nav2Gt(OST125046)Lex (more )
Structure Level Pattern Image Note
TS28: brain Trace 2_P17 Hyp 5'Nav2 A near absence of staining was observed.

Specimen 2 Adult WT: postnatal adult (more )
Structure Level Pattern Image Note
TS28: brain Weak 2_Adult WT 5'Nav2
TS28: cerebral cortex Weak 2_Adult WT 5'Nav2
TS28: thalamus Trace 2_Adult WT 5'Nav2

Specimen 2 Adult Hyp: postnatal adult; Nav2Gt(OST125046)Lex/Nav2Gt(OST125046)Lex (more )
Structure Level Pattern Image Note
TS28: brain Trace 2_Adult Hyp 5'Nav2 A near absence of staining was observed.

Specimen 4A': embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cerebellum primordium Present Regionally restricted 4A' Expression was detected in the region of the cerebellar primordium where cerebellar granule cell precursor cells were found.

Specimen 4B': embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cerebellum Present Regionally restricted 4B' Expression was detected in the region of the cerebellar primordium where cerebellar granule cell precursor cells were found.

Specimen 4C: embryonic day 17.5 (more )
Note: Two probes were used in this publication MGI:6405020 and MGI:6405021. The probe used in this specimen was not specified. However, authors noted that the 5'Nav2 and 3'Nav2 probes yielded similar staining patterns at all stages.
Structure Level Pattern Image Note
TS25: cerebellum external granule cell layer Present 4C' , 4C

Specimen 4D: postnatal day 0 (more )
Note: Two probes were used in this publication MGI:6405020 and MGI:6405021. The probe used in this specimen was not specified. However, authors noted that both probe sets had similar results.
Structure Level Pattern Image Note
TS27: cerebellum external granule cell layer Present Regionally restricted 4D , 4D' Expression was most densely expressed in the postmitotic premigratory granule cells, the premigratory layer.

Specimen 4E: postnatal day 7 (more )
Note: Two probes were used in this publication MGI:6405020 and MGI:6405021. The probe used in this specimen was not specified. However, authors noted that both probe sets had similar results.
Structure Level Pattern Image Note
TS28: cerebellum external granule cell layer Present Regionally restricted 4E , 4E' Expression was most densely expressed in the postmitotic premigratory granule cells, the premigratory layer.

Specimen 4F: postnatal day 17 (more )
Note: Two probes were used in this publication MGI:6405020 and MGI:6405021. The probe used in this specimen was not specified. However, authors noted that both probe sets had similar results.
Structure Level Pattern Image Note
TS28: cerebellum internal granule cell layer Present 4F , 4F'
TS28: cerebellum molecular layer Absent 4F' , 4F

Specimen 5C: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: cerebellum internal granule cell layer Weak Diffuse 5C' , 5C
TS28: cerebellum white matter Weak Diffuse 5C' , 5C Diffuse, low-level expression was detected in the fiber tracts.

Specimen 6C: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: hippocampus Present Regionally restricted 6C Expression was detected in cells forming the cornu ammonis. Positive cells were also seen in the intermediate zone.
TS25: dentate gyrus Present Regionally restricted 6C Expression was detected in a small number of cells forming the upper blade of the developing dentate gyrus.

Specimen 6D: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: hippocampus layer Present Regionally restricted 6D Expression was observed throughout the cornu ammonis.

Specimen 6E: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: hippocampus Present Regionally restricted 6E Expression was distributed throughout the cornu ammonis.
TS28: dentate gyrus Present Regionally restricted 6E' , 6E Expression was detected in the outer shells of the developing blades of the dentate gyrus.
TS28: dentate gyrus hilus Present Regionally restricted 6E , 6E' Expression was detected in a few cells in the region of the dentate gyrus migration stream in the hilus region.

Specimen 6F: postnatal day 17 (more )
Structure Level Pattern Image Note
TS28: dentate gyrus Present Regionally restricted 6F' , 6F Expression was detected in a larger fraction of each blade at postnatal day 17.

Specimen 6G: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hippocampus layer Weak Regionally restricted 6G Light expression was observed in cells throughout the cornu ammonis.
TS28: dentate gyrus Weak 6G' , 6G Light expression was observed in cells throughout the dentate gyrus.

Specimen 7A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cerebral cortex Absent 7A , 7A'

Specimen 7B: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cerebral cortex Present Regionally restricted 7B' , 7B Expression was most apparent where neuroepithelial cells had exited the germinal compartments and were differentiating and migrating toward the nascent cortical plate.
TS22: cerebral cortex marginal layer Absent 7B' , 7B No staining was detected in the molecular zone or outermost layer of the cortex.

Specimen 7C: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: cerebral cortex Present Non-Uniform 7C' , 7C At E17.5, staining was seen throughout the developing cortex.
TS25: cortical plate Strong Non-Uniform 7C' , 7C Strongest staining was noted at the upper and lower edges of the cortical plate.
TS25: cerebral cortex subventricular zone Present 7C' , 7C Expression was detected in cells exiting the ventricular zone/subventricular zone.
TS25: cerebral cortex ventricular layer Present 7C' , 7C Expression was detected in cells exiting the ventricular zone/subventricular zone.

Specimen 7D: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: cortical plate Present Widespread 7D' , 7D
TS27: cerebral cortex subventricular zone Present Regionally restricted 7D , 7D' Expression was detected in cells exiting the ventricular zone/subventricular zone.
TS27: cerebral cortex ventricular zone Present Regionally restricted 7D , 7D' Expression was detected in cells exiting the ventricular zone/subventricular zone.

Specimen 7E: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Present Widespread 7E , 7E'
TS28: cortical layer II Strong 7E , 7E'
TS28: cortical layer III Strong 7E , 7E'
TS28: cerebral hemisphere white matter Absent 7E , 7E'

Specimen 8A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: zona limitans intrathalamica Present 8B , 8A

Specimen 8C: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: thalamus Present 8C

Specimen 8E: embryonic day 17.5 (more )
Note: Lateral section location.
Structure Level Pattern Image Note
TS25: thalamus Present 8E Expression was most dense in a region of the thalamus adjacent to the hippocampus.

Specimen 8F: postnatal day 0 (more )
Note: Lateral section location.
Structure Level Pattern Image Note
TS27: thalamus Present 8F Expression was most dense in a region of the thalamus adjacent to the hippocampus.

Specimen 8G: postnatal day 7 (more )
Note: Lateral section location.
Structure Level Pattern Image Note
TS28: thalamus Weak 8G By P7, staining began to dissipate. Expression was most dense in a region of the thalamus adjacent to the hippocampus.

Specimen 8H: embryonic day 17.5 (more )
Note: Medial section location.
Structure Level Pattern Image Note
TS25: thalamus Present 8H

Specimen 8I: postnatal day 0 (more )
Note: Medial section location.
Structure Level Pattern Image Note
TS27: thalamus Present 8I

Specimen 8J: postnatal day 7 (more )
Note: Medial section location.
Structure Level Pattern Image Note
TS28: thalamus Weak 8J By P7, staining began to dissipate.

Specimen S1 E12.5 WT: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: brain Present Widespread S1E12.5 WT 5'Nav2
TS20: cerebral cortex Absent S1E12.5 WT 5'Nav2
TS20: cerebellum primordium Present Regionally restricted S1E12.5 WT 5'Nav2 Expression was detected where the granule cell precursors are found.

Specimen S1 E12.5 Hyp: embryonic day 12.5; Nav2Gt(OST125046)Lex/Nav2Gt(OST125046)Lex (more )
Structure Level Pattern Image Note
TS20: brain Trace S1E12.5 Hyp 5'Nav2
TS20: cerebellum primordium Absent S1E12.5 Hyp 5'Nav2

Specimen S1 E14.5 WT: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: brain Present Widespread S1E14.5 WT 5'Nav2
TS22: cerebellum Present Regionally restricted S1E14.5 WT 5'Nav2 Expression was detected where the granule cell precursors are found.
TS22: telencephalon Present S1E14.5 WT 5'Nav2

Specimen S1 E14.5 Hyp: embryonic day 14.5; Nav2Gt(OST125046)Lex/Nav2Gt(OST125046)Lex (more )
Structure Level Pattern Image Note
TS22: brain Trace S1E14.5 Hyp 5'Nav2
TS22: cerebellum Absent S1E14.5 Hyp 5'Nav2
TS22: telencephalon Absent S1E14.5 Hyp 5'Nav2


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last database update
05/21/2024
MGI 6.23
The Jackson Laboratory