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Gene Expression Data
Assay Details
Assay
Reference: J:37323 Chiappetta G, et al., High level expression of the HMGI (Y) gene during embryonic development. Oncogene. 1996 Dec 5;13(11):2439-46
Assay type: RNA in situ
MGI Accession ID: MGI:6388420
Gene symbol: Hmga1
Gene name: high mobility group AT-hook 1
Probe: Hmgi(y) cDNA2
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Assay notes: Another probe (MGI:6388410) gave perfectly matching results.
Results
Specimen 3a: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: embryo ectoderm Strong 3a
TS13: embryo endoderm Strong 3a
TS13: embryo mesoderm Strong 3a

Specimen 3b: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: branchial arch Strong 3b
TS17: central nervous system Strong 3b
TS17: liver Strong 3b
TS17: somite Strong 3b

Specimen 3c: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: Rathke's pouch Strong 3c
TS17: central nervous system Strong 3c
TS17: pancreas primordium Strong 3c

Specimen 3d: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: 1st branchial arch Strong 3d

Specimen 3e: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: future spinal cord Present 3e

Specimen 3f: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: forelimb bud Strong 3f
TS17: olfactory placode Strong 3f
TS17: otocyst Strong 3f
TS17: stomach Strong 3f

Specimen 3g: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: 1st branchial arch maxillary component Strong 3g

Specimen 4a: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: central nervous system Strong Regionally restricted 4a Expressed mainly confined to the germinal layer.
TS20: telencephalon Strong Regionally restricted 4a Expressed in the basal grisea of telencephalic vescicles.
TS20: lung Very strong Regionally restricted 4a Expressed in the bronchiolar epithelium.

Specimen 4b: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: spinal ganglion Strong 4b
TS20: gut Very strong 4b

Specimen 4c: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: tongue muscle Very strong 4c Expressed in the extrinsic and intrinsic muscles.
TS20: nephron Very strong 4c mesonephric vesicle

Specimen 4d: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: spinal cord Present 4d
TS20: telencephalon Present 4d

Specimen 4e: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: diencephalon Present 4e
TS20: gut Present 4e
TS20: liver Present 4e
TS20: nasal epithelium Present 4e

Specimen 4f: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: metencephalon Present 4f
TS20: midbrain Present 4f

Specimen 4g: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: diencephalon Present 4g
TS20: eye Present 4g
TS20: telencephalon Present 4g
TS20: trigeminal ganglion Present 4g

Specimen 4h: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: liver Strong Regionally restricted 4h Expressed in cellular clusters.

Specimen 4i: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: liver Strong Regionally restricted 4i Expressed in cellular clusters.

Specimen 4j: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: hair follicle Present 4j Highest expression.
TS22: thymus primordium Present 4j Highest expression.
TS22: thyroid gland Present 4j Highest expression.
TS22: tongue Present 4j Highest expression.
TS22: tooth Present 4j Highest expression.

Specimen 4k: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: hair follicle Present 4k Highest expression.
TS22: thymus primordium Present 4k Highest expression.
TS22: thyroid gland Present 4k Highest expression.
TS22: tongue Present 4k Highest expression.
TS22: tooth Present 4k Highest expression.

Specimen 4l: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: hair follicle Present 4l Highest expression.
TS22: thymus primordium Present 4l Highest expression.
TS22: thyroid gland Present 4l Highest expression.
TS22: tongue Present 4l Highest expression.
TS22: tooth Present 4l Highest expression.

Specimen 5a: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: cortical plate Present 5a Relevant high expression.
TS25: telencephalon Present Regionally restricted 5a Relevant high expression in rostral region.

Specimen 5b: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: back of trunk Present Regionally restricted 5b Relevant high expression in muscle backbones.
TS25: epidermis Very strong 5b Relevant high expression.
TS25: hair follicle Very strong 5b Relevant high expression.
TS25: intestine Very strong 5b Relevant high expression.
TS25: thymus Very strong 5b Relevant high expression.

Specimen 5c: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: bronchiole epithelium Present 5c Relevant high expression in a subset of cells.
TS25: epidermis Very strong 5c Relevant high expression.
TS25: hair follicle Very strong 5c Relevant high expression.
TS25: intestine Very strong 5c Relevant high expression.
TS25: thymus Very strong 5c Relevant high expression.

Specimen 5d: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: metanephros Present 5d Relevant high expression.
TS25: seminiferous cord Strong 5d

Specimen 6A: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: dermomyotome Present 6A
TS17: sclerotome Present 6A

Specimen 6B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: dermomyotome Present 6B Higher expression compared with that of the intervertebral disc.
TS17: sclerotome Present 6B Higher expression compared with that of the intervertebral disc.
TS17: axial skeleton Present Regionally restricted 6B Expressed in the segmental interzone committed to originate intervertebral disc.

Specimen 6C: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: future spinal cord Present Regionally restricted 6C Expressed in the medio-dorsal area with a decrease in the basal plate.

Specimen 6D: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: spinal cord Present Uniform 6D Expressed homogeneously throughout all the dorso-ventral axis.
TS25: spinal ganglion Strong 6D

Specimen 6E: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: cortical plate Present 6E Relevant high expression.
TS25: telencephalon Present Regionally restricted 6E Relevant high expression in rostral region.

Specimen 6F: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: retina Present 6F Relevant high expression.

Specimen 6G: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: lens epithelium Very strong 6G
TS25: retina Very strong 6G

Specimen 6H: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: olfactory epithelium Present 6H Relevant high expression.
TS20: respiratory system epithelium Present 6H Relevant high expression.

Specimen 6I: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: lung Very strong Regionally restricted 6I Expressed in the bronchiolar epithelium.

Specimen 6J: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: bronchiole epithelium Present Regionally restricted 6J Relevant high expression in a subset of cells.
TS25: bronchus epithelium Present 6J

Specimen 6K: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: mesenchyme of metanephros Very strong 6K
TS20: nephron Very strong 6K

Specimen 6L: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: glomerular tuft Present 6L Relevant high expression.

Specimen 6M: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: peritoneal component Very strong 6M

Specimen 6N: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: intestine epithelium Very strong 6N


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory