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Gene Expression Data
Assay Details
Assay
Reference: J:199400 van den Heuvel DM, et al., Spatiotemporal expression of repulsive guidance molecules (RGMs) and their receptor neogenin in the mouse brain. PLoS One. 2013;8(2):e55828
Assay type: RNA in situ
MGI Accession ID: MGI:5693257
Gene symbol: Unc5a
Gene name: unc-5 netrin receptor A
Probe: Unc5a cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 2A: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: main olfactory bulb mitral cell layer Present 2A
Specimen 2E: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb granule cell layer Present 2E Expression was reduced compared to E16.5.
TS28: main olfactory bulb mitral cell layer Present 2E Expression was reduced compared to E16.5.
Specimen Table S2 E16.5: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: ethmoid bone cribriform plate Absent
TS24: main olfactory bulb ventricular layer Absent
TS24: olfactory epithelium Absent
TS24: accessory olfactory bulb Moderate
TS24: main olfactory bulb internal plexiform layer Moderate
TS24: main olfactory bulb prospective granule cell layer Moderate
TS24: main olfactory bulb external plexiform layer Weak
TS24: main olfactory bulb prospective glomerular layer Weak
TS24: main olfactory bulb mitral cell layer Strong
Specimen Table S2 P5: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: ethmoid bone cribriform plate Absent
TS28: main olfactory bulb external plexiform layer Absent
TS28: main olfactory bulb glomerular layer Absent
TS28: main olfactory bulb internal plexiform layer Absent
TS28: main olfactory bulb ventricular layer Absent
TS28: olfactory epithelium Absent
TS28: main olfactory bulb granule cell layer Weak
TS28: main olfactory bulb mitral cell layer Weak
TS28: anterior olfactory nucleus Strong
Specimen Table S2 Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb external plexiform layer Absent
TS28: main olfactory bulb glomerular layer Absent
TS28: main olfactory bulb internal plexiform layer Absent
TS28: main olfactory bulb ventricular layer Absent
TS28: main olfactory bulb mitral cell layer Moderate
TS28: main olfactory bulb granule cell layer Weak
TS28: anterior olfactory nucleus Strong
Specimen 5A: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cerebral cortex subventricular zone Present 5A
TS24: cerebral cortex ventricular layer Present 5A
TS24: cortical plate Present 5A
TS24: cortical subplate Present 5A
Specimen 5E: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Present Widespread 5E
Specimen Table S3 E16.5: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cerebral cortex marginal layer Absent
TS24: telencephalon pia mater Absent
TS24: cortical plate Strong
TS24: cerebral cortex subventricular zone Moderate
TS24: cerebral cortex ventricular layer Moderate
TS24: cortical subplate Moderate
TS24: cerebral cortex intermediate zone Weak
Specimen Table S3 P5: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: cortical layer I Weak
TS28: cortical layer II Weak
TS28: cortical layer III Weak
TS28: cortical layer IV Weak
TS28: cortical layer V Weak
TS28: cortical layer VI Weak
TS28: cerebral cortex ventricular zone Absent
Specimen Table S3 Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical layer I Weak
TS28: cortical layer II Weak
TS28: cortical layer III Weak
TS28: cortical layer IV Weak
TS28: cortical layer VI Weak
TS28: cortical layer V Moderate
TS28: cerebral cortex ventricular zone Absent
Specimen 7A: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: hippocampus Present Regionally restricted 7A Expression was detected in the CA region.
TS24: dentate gyrus primordium Present 7A
Specimen 7E: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: dentate gyrus Present 7E
TS28: hippocampus CA1 Present 7E
TS28: hippocampus CA2 Present 7E
TS28: hippocampus CA3 Present 7E
Specimen Table S4 E16.5: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: dentate gyrus primordium Strong
TS24: entorhinal cortex Strong
TS24: hippocampus Strong Regionally restricted Expression was moderate in the CA region and subventricular zone.
TS24: hippocampus ventricular layer Moderate
Specimen Table S4 P5: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: hippocampus CA1 Moderate
TS28: hippocampus CA2 Moderate
TS28: hippocampus CA3 Strong
TS28: dentate gyrus Moderate
TS28: dentate gyrus granule cell layer Moderate
TS28: dentate gyrus molecular layer Absent
TS28: dentate gyrus polymorphic layer Absent
TS28: hippocampus stratum lacunosum Absent
TS28: hippocampus stratum oriens Absent
TS28: hippocampus stratum radiatum Absent
TS28: entorhinal cortex Weak
Specimen Table S4 Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hippocampus CA1 Strong
TS28: hippocampus CA2 Moderate
TS28: hippocampus CA3 Moderate
TS28: dentate gyrus Strong
TS28: dentate gyrus granule cell layer Strong
TS28: entorhinal cortex Strong
TS28: dentate gyrus molecular layer Absent
TS28: dentate gyrus polymorphic layer Absent
TS28: hippocampus stratum lacunosum Absent
TS28: hippocampus stratum oriens Absent
TS28: hippocampus stratum radiatum Absent
Specimen 10A: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: lateral habenular nucleus Strong 10A
TS24: medial habenular nucleus Strong 10A
Specimen 10E: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: lateral habenular nucleus Weak 10E
TS28: medial habenular nucleus Weak 10E
Specimen 10I: postnatal adult (more )
Structure Level Pattern Image Note
TS28: habenula Absent 10I
Specimen Table S5 E16.5: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: midbrain Moderate Regionally restricted Expression was detected in the ventral tegmental area. There was no expression in the substantia nigra.
TS24: interpeduncular nucleus Strong
TS24: medial habenular nucleus Strong
TS24: telencephalon septum Strong
TS24: corpus striatum Weak
TS24: lateral habenular nucleus Very strong
TS24: thalamus Very strong
TS24: hypothalamus Strong Regionally restricted Expression was strong in the lateral hypothalamus.
Specimen Table S5 P5: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: lateral habenular nucleus Weak
TS28: medial habenular nucleus Weak
TS28: telencephalon septum Weak
TS28: thalamus Weak
TS28: corpus striatum Absent
TS28: hypothalamus lateral zone Absent
TS28: interpeduncular nucleus Absent
TS28: paraventricular thalamic nucleus Absent
TS28: substantia nigra Absent
TS28: ventral tegmental area Absent
Specimen Table S5 Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: corpus striatum Absent
TS28: hypothalamus lateral zone Absent
TS28: interpeduncular nucleus Absent
TS28: lateral habenular nucleus Absent
TS28: medial habenular nucleus Absent
TS28: paraventricular thalamic nucleus Absent
TS28: substantia nigra Absent
TS28: thalamus Absent
TS28: ventral tegmental area Absent
TS28: telencephalon septum Moderate
Specimen 13A: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cerebellum external granule cell layer Present 13A
Specimen 13E: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: cerebellum internal granule cell layer Present 13E
Specimen Table S6 E16.5: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: deep cerebellar nucleus Strong
TS24: cerebellum Purkinje cell cluster Moderate
TS24: cerebellum external granule cell layer Moderate
TS24: cerebellum ventricular layer Absent
Specimen Table S6 P5: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: cerebellum internal granule cell layer Moderate
TS28: cerebellum Purkinje cell layer Absent
TS28: cerebellum external granule cell layer Absent
Specimen Table S6 Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Moderate
TS28: cerebellum granule cell layer Moderate
TS28: cerebellum molecular layer Absent
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory