Gene Expression Data
Assay Details
Assay
|
Reference:
|
J:117268
Nagae S, et al., Temporal and spatial expression profiles of the Fat3 protein, a giant cadherin molecule, during mouse development. Dev Dyn. 2007 Feb;236(2):534-43
|
Assay type:
|
Immunohistochemistry
|
MGI Accession ID:
|
MGI:5551593
|
Gene symbol:
|
Fat3
|
Gene name:
|
FAT atypical cadherin 3
|
Antibody:
|
Anti-Fat3
|
Detection system:
|
Secondary antibody coupled to Alexa Fluor
|
|
Results
|
Specimen
3A:
embryonic day 14.5
(more )
Specimen
3A:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: cerebral cortex |
Present |
Regionally restricted |
3A
|
Expression was detected in apical and basal dendrites.
|
Specimen
3B:
postnatal day 1
(more )
Specimen
3B:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 1
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS27: cerebral cortex |
Present |
Regionally restricted |
3B
|
Expression was detected in apical and basal dendrites.
|
Specimen
3C,C'':
postnatal day 1
(more )
Note: Double labeled: red - Fat3; green - Map2 (assay MGI:5551594).
Specimen
3C,C'':
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 1
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: red - Fat3; green - Map2 (assay MGI:5551594).
|
Specimen
3D:
embryonic day 14.5
(more )
Note: Double labeled: red - Fat3; green - Cntn2 (TAG-1; assay MGI:5551598).
Specimen
3D:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: red - Fat3; green - Cntn2 (TAG-1; assay MGI:5551598).
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: telencephalon |
Present |
Regionally restricted |
3D
|
Expression was detected in corticofugal axons, overlapping with Tag-1 (Cntn2) signal.
|
Specimen
3E:
embryonic day 14.5
(more )
Specimen
3E:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
3F:
postnatal day 1
(more )
Specimen
3F:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 1
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
3G:
embryonic day 14.5
(more )
Specimen
3G:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: hippocampus |
Present |
Regionally restricted |
3G
|
Expression was detected in the primitive plexiform layer.
|
Specimen
3H:
postnatal day 1
(more )
Specimen
3H:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 1
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
3I:
embryonic day 14.5
(more )
Note: Double labeled: red - Fat3; green - Cntn2 (TAG-1; assay MGI:5551598).
Specimen
3I:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: red - Fat3; green - Cntn2 (TAG-1; assay MGI:5551598).
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: midbrain |
Present |
Regionally restricted |
3I
|
Expression was detected in the fasciculus retroflexus.
|
Specimen
3J:
postnatal day 1
(more )
Specimen
3J:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 1
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS27: midbrain |
Present |
Regionally restricted |
3J
|
Expression was detected in the fasciculus retroflexus, mammillotegmental tract, and mammillothalamic tract.
|
Specimen
3K:
embryonic day 14.5
(more )
Note: Double labeled: red - Fat3; green - L1cam (assay MGI:5551601).
Specimen
3K:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: red - Fat3; green - L1cam (assay MGI:5551601).
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: midbrain |
Present |
Regionally restricted |
3K
|
Expression was detected in the midbrain and the mammillotegmental tract.
|
TS22: spinal cord |
Present |
Regionally restricted |
3K
|
Expression was detected in axon fibers.
|
Specimen
3L:
postnatal day 1
(more )
Specimen
3L:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 1
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
3M:
embryonic day 14.5
(more )
Note: Double labeled: red - Fat3; green - L1cam (assay MGI:5551601).
Specimen
3M:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: red - Fat3; green - L1cam (assay MGI:5551601).
|
Specimen
data not shown E17.5:
embryonic day 17.5
(more )
Specimen
data not shown E17.5:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 17.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
data not shown P1:
postnatal day 1
(more )
Specimen
data not shown P1:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 1
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
3N:
embryonic day 14.5
(more )
Specimen
3N:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: spinal cord |
Present |
Regionally restricted |
3N
|
Expression was detected in axon tracts or fascicles.
|
Specimen
3O:
postnatal day 1
(more )
Specimen
3O:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 1
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
4G:
embryonic day 11.5
(more )
Specimen
4G:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: telencephalon |
Present |
Regionally restricted |
4G
|
Expression was detected in the most rostral region of the cortex in the presumptive mitral cells.
|
Specimen
4H:
embryonic day 14.5
(more )
Specimen
4H:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: main olfactory bulb |
Present |
Regionally restricted |
4H
|
Expression was widely detected in the intermediate zone and in the mitral cell layer.
|
Specimen
4I:
embryonic day 17.5
(more )
Specimen
4I:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 17.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS25: main olfactory bulb |
Present |
Regionally restricted |
4I
|
Expression became concentrated in the external plexiform layer.
|
Specimen
4J,K:
postnatal day 3
(more )
Specimen
4J,K:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 3
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
4L:
embryonic day 14.5
(more )
Note: Double labeled: green - Fat3; red - L1cam (assay MGI:5551601).
Specimen
4L:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: green - Fat3; red - L1cam (assay MGI:5551601).
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: telencephalon |
Present |
Regionally restricted |
4L
|
Expression was detected in the lateral olfactory tract.
|
Specimen
not shown:
postnatal adult
(more )
Specimen
not shown:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
5A,A'':
embryonic day 17.5
(more )
Note: Double labeled: red - Fat3; green - Gap43 (assay MGI:5551626).
Specimen
5A,A'':
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 17.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: red - Fat3; green - Gap43 (assay MGI:5551626).
|
Structure |
Level |
Pattern |
Image |
Note |
TS25: main olfactory bulb |
Present |
Regionally restricted |
5A''
,
5A
|
Expression was detected in the dendrites and axons of mitral cells. There was no co-expression with Gap43 in the olfactory sensory neuron axons in the outer nuclear layer, but partial overlap was noted at the outer nuclear layer border.
|
Specimen
5B,B'':
postnatal day 1
(more )
Note: Double labeled: red - Fat3; green - Gap43 (assay MGI:5551626).
Specimen
5B,B'':
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 1
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: red - Fat3; green - Gap43 (assay MGI:5551626).
|
Specimen
5C,C'':
postnatal day 1
(more )
Note: Double labeled: red - Fat3; green - Map2 (assay MGI:5551594).
Specimen
5C,C'':
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 1
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: red - Fat3; green - Map2 (assay MGI:5551594).
|
Specimen
5D,D'':
postnatal day 1
(more )
Note: Double labeled: red - Fat3; green - Mapt (Tau; assay MGI:5551622).
Specimen
5D,D'':
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 1
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: red - Fat3; green - Mapt (Tau; assay MGI:5551622).
|
Specimen
6E:
embryonic day 14.5
(more )
Specimen
6E:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: retina |
Present |
Regionally restricted |
6E
|
Expression was detected in the nerve fiber layer.
|
Specimen
6F:
embryonic day 17.5
(more )
Specimen
6F:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 17.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS25: neural retina |
Present |
Regionally restricted |
6F
|
Expression was detected in the inner plexiform layer.
|
Specimen
6G,H:
postnatal day 11
(more )
Specimen
6G,H:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 11
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: retina inner plexiform layer |
Present |
Non-Uniform |
6G
,
6H
|
Expression in the inner plexiform layer reached a maximum at P11. Sublaminar structures were differentially labeled.
|
Specimen
6I:
postnatal day 11
(more )
Specimen
6I:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 11
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
not shown:
postnatal adult
(more )
Specimen
not shown:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
6J:
postnatal day 1
(more )
Specimen
6J:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 1
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
|