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Gene Expression Data
Assay Details
Assay
Reference: J:63701 Li H, et al., A retinoic acid synthesizing enzyme in ventral retina and telencephalon of the embryonic mouse. Mech Dev. 2000 Jul;95(1-2):283-9
Assay type: RNA in situ
MGI Accession ID: MGI:5464015
Gene symbol: Aldh1a3
Gene name: aldehyde dehydrogenase family 1, subfamily A3
Results
Specimen 2a E8.0: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: head Absent 2a E8.0

Specimen 2a E8.3: embryonic day 8.3 (more )
Structure Level Pattern Image Note
TS12: head Absent 2a E8.3

Specimen 2a E8.5: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: head Present Regionally restricted 2a E8.5 Expression was detected in the rostral head.
TS13: surface ectoderm Present Regionally restricted 2a E8.5 Expression was detected in the epidermis covering the posterior part of the optic recess and extending behind it.

Specimen 2a E8.8: embryonic day 8.8 (more )
Structure Level Pattern Image Note
TS13: head Strong Regionally restricted 2a E8.8 Expression became intense in the rostral head.
TS13: future spinal cord Present Regionally restricted 2a E8.8 Expression was seen in streaks along the spinal cord.
TS13: surface ectoderm Strong Regionally restricted 2a E8.8 Intense expression was detected in the surface ectoderm in a triangular-shaped area around the eye.

Specimen 2b: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: eye Present 2b
TS15: lens placode Present 2b
TS15: olfactory placode Present 2b
TS15: head Present Regionally restricted 2b Expression was seen in the eye/olfactory region and adjoining face.
TS15: surface ectoderm Present Regionally restricted 2b Expression was seen in the eye/olfactory region and adjoining face.

Specimen 2c: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: eye Present 2c
TS16: lens pit Present 2c
TS16: nasal pit Present 2c
TS16: head Present Regionally restricted 2c Expression was seen in the eye/olfactory region and adjoining face. The labeled area is still contiguous, but is starting to constrict down to the two placodes.
TS16: surface ectoderm Present Regionally restricted 2c Expression was seen in the eye/olfactory region and adjoining face. The labeled area is still contiguous, but is starting to constrict down to the two placodes.

Specimen 2d: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: lens pit Present 2d
TS17: nasal pit Present 2d
TS17: otocyst Present 2d

Specimen 2e: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: lens vesicle Absent 2e When the lens closed, expression was lost.
TS19: nasal process ectoderm Absent 2e As the olfactory pit develops into the olfactory organ, expression disappears from the external surface of the nose.
TS19: olfactory epithelium Strong Regionally restricted 2e The internal epithelium of the olfactory organ was heavily stained.
TS19: eye Present Regionally restricted 2e Surface labeling was in the eye region in a rectangular shape. It covered the eye obliquely, with a row of labeled cells extending into the naso-lacrimal groove.
TS19: naso-lacrimal groove Present 2e
TS19: pigmented retinal epithelium Present Regionally restricted 2e Expression was in the dorsal region.

Specimen 2f E14.0: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: retina Strong Regionally restricted 2f E14 Expression was detected in the ventral retina.

Specimen 2f E15.0: embryonic day 15.0 (more )
Structure Level Pattern Image Note
TS23: retina Strong Regionally restricted 2f E15 Expression was detected in the ventral retina.

Specimen 2f P0.5: postnatal day 0.5 (more )
Structure Level Pattern Image Note
TS27: retina Ambiguous 2f P0.5 Expression in the retina slowly disappears postnatally.

Specimen 3 RALDH3: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: eye Strong 3_RALDH3
TS14: head Strong Regionally restricted 3_RALDH3 Expression was detected around the entire eye region and significantly beyond it.

Specimen 4a: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: surface ectoderm Present Regionally restricted 4a Expression was detected in the epidermis covering the posterior part of the optic recess and extending behind it.

Specimen 4b: embryonic day 8.8 (more )
Structure Level Pattern Image Note
TS13: surface ectoderm Strong Regionally restricted 4b Expression was detected in the surface ectoderm in a triangular-shaped area around the eye.

Specimen 4c: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: lens placode Strong 4c
TS15: optic cup Present Regionally restricted 4c Expression was detected in the dorsal retinal pigmented epithelium and the ventral retina.

Specimen 4d: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: nasal pit Strong 4d

Specimen 4e: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: lens pit Present 4e

Specimen 4f: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: lens vesicle Absent 4f When the lens closed, expression was lost.
TS20: retina Present Graded 4f Expression covers the ventral two-thirds of the retina up to a horizontal border above the optic disc. The expression forms a ventro-dorsal gradient.

Specimen not shown: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: telencephalon Present

Specimen 5a: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: cerebral cortex Present Regionally restricted 5a Expression was detected in the ventral cortex.
TS20: lateral ganglionic eminence Present Regionally restricted 5a Strongest staining was in the rostral part.
TS20: medial ganglionic eminence Absent 5a

Specimen 5b: embryonic day 13.5 (more )
Note: Thick tissue slice.
Structure Level Pattern Image Note
TS21: lateral ganglionic eminence Present 5b
TS21: telencephalon Present Regionally restricted 5b Expression was in a streak extending from the piriform cortex with a long arm deep into the lateral ganglionic eminence and a short arm into the septum.
TS21: medial ganglionic eminence Absent 5b

Specimen 5c: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: lateral ganglionic eminence Present Regionally restricted 5c
TS22: piriform cortex Present 5c
TS22: telencephalon septum Present 5c
TS22: medial ganglionic eminence Absent 5c

Specimen 6a RALDH3: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: head Present 6a RALDH3

Specimen 6b: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: surface ectoderm Present 6b

Specimen 6e: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: head Present Regionally restricted 6e Expression was detected in the eyelid region.
TS19: retina Present Regionally restricted 6e Expression was detected in ventral and dorsal compartments.
TS19: nose Present 6e
TS19: inner ear Weak Regionally restricted 6e Expression was weak in the otic vesicle.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/14/2024
MGI 6.23
The Jackson Laboratory