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Gene Expression Data
Assay Details
Assay
Reference: J:39280 Furukawa T, et al., rax, a novel paired-type homeobox gene, shows expression in the anterior neural fold and developing retina. Proc Natl Acad Sci U S A. 1997 Apr 1;94(7):3088-93
Assay type: RNA in situ
MGI Accession ID: MGI:5439589
Gene symbol: Rax
Gene name: retina and anterior neural fold homeobox
Probe: rax cDNA5
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen Not shown: embryonic day 6.5 (more )
Structure Level Pattern Image Note
TS9: embryo Absent

Specimen 4A: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: future brain neural fold Present Regionally restricted 4A Expression is present in the cephalic neural fold, in the area that will later become the forebrain and midbrain.

Specimen 4B: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: future prosencephalon Strong 4B
TS13: optic pit Present 4B Expression is present in optic placode.

Specimen 4C: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: optic vesicle Strong 4C

Specimen 4D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: optic vesicle Strong 4D
TS15: optic stalk Present 4D
TS15: diencephalon Present Regionally restricted 4D Expression is present in the ventral diencephalon.

Specimen 4E/F: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: optic cup Present Regionally restricted 4E , 4F Expression is observed only in the retina; it is not present in the lens, optic fissure, or elsewhere in the embryo.
TS17: lens pit Absent 4F , 4E
TS17: optic stalk Absent 4F , 4E

Specimen 4G/H: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: retina Present 4H , 4G Expression is observed only in the retina; it is not present in the lens, optic fissure, or elsewhere in the embryo.
TS19: lens vesicle Absent 4H , 4G
TS19: optic fissure Absent 4H , 4G

Specimen Not shown: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: neural ectoderm Present Regionally restricted Expression is present in the anterior central nervous system.

Specimen 5A: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: future brain neural fold Present Regionally restricted 5A Expression is present in the anterior head fold.
TS13: optic pit Strong 5A Expression is present in the region containing the optic evaginations.

Specimen 5F: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: optic vesicle Present 5F Expression is present in the optic vesicle and stalk.
TS14: future diencephalon Present Regionally restricted 5F Expression is present in the ventral diencephalon.

Specimen 6A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: diencephalon Present Regionally restricted 6A Expression is present in the ventral diencephalon.
TS15: optic vesicle Present 6A

Specimen 6B: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: neural retinal epithelium Strong 6B
TS19: cornea Absent 6B
TS19: lens vesicle Absent 6B

Specimen 6C: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: neural retina Strong 6C
TS26: retina Present Regionally restricted 6C Expression is present in the neural retina. It is not present in the ganglion cell layer.
TS26: cornea Absent 6C
TS26: lens Absent 6C

Specimen 6D/G: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: retina inner nuclear layer Present Scattered 6G , 6D Expression is present in the ventricular layer. (These cells are intermixed with the outer and inner nuclear layers.)
TS27: retina outer nuclear layer Present Scattered 6G , 6D Expression is present in the ventricular layer. (These cells are intermixed with the outer and inner nuclear layers.)
TS27: retina ganglion cell layer Absent 6D , 6G

Specimen 6E/H: postnatal day 6 (more )
Structure Level Pattern Image Note
TS28: retina outer nuclear layer Present Non-Uniform 6E , 6H Expression is relatively strong near the middle of the developing retinal layers, where the most immature cells are located.

Specimen 6F/I: postnatal adult (more )
Structure Level Pattern Image Note
TS28: retina Absent 6F , 6I


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory