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Gene Expression Data
Assay Details
Assay
Reference: J:171106 Suzuki-Hirano A, et al., Dynamic spatiotemporal gene expression in embryonic mouse thalamus. J Comp Neurol. 2011 Feb 15;519(3):528-43
Assay type: RNA in situ
MGI Accession ID: MGI:5294439
Gene symbol: Barhl2
Gene name: BarH like homeobox 2
Probe: Barhl2 cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 3B: embryonic day 12.5 (more )
Note: Double labeled: blue - Barhl2; brown - Shh (assay MGI:5294438).
Structure Level Pattern Image Note
TS20: diencephalon ventricular layer Strong 3B Expression is present in the entire prosomere 2 ventricular zone.
Specimen 3C: embryonic day 12.5 (more )
Note: Double labeled: blue - Barhl2; brown - Shh (assay MGI:5294438).
Structure Level Pattern Image Note
TS20: diencephalon ventricular layer Strong 3C Expression is present in the entire prosomere 2 ventricular zone.
Specimen 3D: embryonic day 12.5 (more )
Note: Double labeled: blue - Barhl2; brown - Shh (assay MGI:5294438).
Structure Level Pattern Image Note
TS20: diencephalon ventricular layer Strong 3D Expression is present in the entire prosomere 2 ventricular zone.
Specimen 3E: embryonic day 12.5 (more )
Note: Double labeled: blue - Barhl2; brown - Shh (assay MGI:5294438).
Structure Level Pattern Image Note
TS20: diencephalon ventricular layer Strong Regionally restricted 3E Expression is present in the entire prosomere 2 ventricular zone but not in the ventral Rim/pTh-R/Zli-shell.
TS20: zona limitans intrathalamica Present Regionally restricted 3E Expression is present in the postmitotic region.
Specimen 3F: embryonic day 12.5 (more )
Note: Double labeled: blue - Barhl2; brown - Shh (assay MGI:5294438).
Structure Level Pattern Image Note
TS20: diencephalon ventricular layer Strong Regionally restricted 3F Expression is present in the entire prosomere 2 ventricular zone but not in the ventral Rim/pTh-R/Zli-shell.
TS20: zona limitans intrathalamica Present Regionally restricted 3F Expression is present in the postmitotic region.
Specimen 8D: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: diencephalon Present Regionally restricted 8D Expression is present throughout prosomeres 1 and 2 and a restricted region of the hypothalamic primordium.
Specimen Not shown: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: diencephalon Present Regionally restricted Expression is present throughout prosomeres 1 and 2 and a restricted region of the hypothalamic primordium.
TS20: hypothalamus Present Regionally restricted Expression is present throughout prosomeres 1 and 2 and a restricted region of the hypothalamic primordium.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
MGI 6.23 		The Jackson Laboratory