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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4945883
Gene symbol: Ccr6
Gene name: C-C motif chemokine receptor 6
Probe: g01900
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g01900 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Widespread g01900_sj_g82_082_e11 , g01900_sj_g82_032_e11
TS19: telencephalon Present Widespread g01900_sj_g82_032_e11 , g01900_sj_g82_082_e11
TS19: midbrain Strong Regionally restricted g01900_sj_g82_032_e11 , g01900_sj_g82_082_e11 Expression was region specific and scattered.
TS19: hindbrain Strong Regionally restricted g01900_sj_g82_032_e11 , g01900_sj_g82_082_e11 Expression was region specific and scattered.
TS19: future spinal cord Strong Regionally restricted g01900_sj_g82_032_e11 , g01900_sj_g82_082_e11 Expression was region specific and scattered.
Specimen g01900 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Widespread g01900_sj_g81_135_e15 , g01900_sj_g81_035_e15 , g01900_sj_g81_085_e15
TS23: ganglionic eminence Present Widespread g01900_sj_g81_085_e15 , g01900_sj_g81_135_e15 , g01900_sj_g81_035_e15
TS23: hindbrain Present Widespread g01900_sj_g81_135_e15 , g01900_sj_g81_035_e15 , g01900_sj_g81_085_e15
TS23: hippocampus Present Widespread g01900_sj_g81_135_e15 , g01900_sj_g81_035_e15 , g01900_sj_g81_085_e15
TS23: hypothalamus Present Widespread g01900_sj_g81_035_e15 , g01900_sj_g81_085_e15 , g01900_sj_g81_135_e15
TS23: midbrain Present Widespread g01900_sj_g81_135_e15 , g01900_sj_g81_035_e15 , g01900_sj_g81_085_e15
TS23: neocortex Present Widespread g01900_sj_g81_085_e15 , g01900_sj_g81_035_e15 , g01900_sj_g81_135_e15
TS23: main olfactory bulb Present Widespread g01900_sj_g81_035_e15 , g01900_sj_g81_135_e15 , g01900_sj_g81_085_e15
TS23: spinal cord Present Widespread g01900_sj_g81_135_e15 , g01900_sj_g81_035_e15 , g01900_sj_g81_085_e15
Specimen g01900 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01900_sj_g88_001_p7 , g01900_sj_g88_051_p7 , g01900_sj_g88_101_p7
TS28: basal ganglia Present Widespread g01900_sj_g88_051_p7 , g01900_sj_g88_001_p7 , g01900_sj_g88_101_p7
TS28: brainstem Present Widespread g01900_sj_g88_101_p7 , g01900_sj_g88_051_p7 , g01900_sj_g88_001_p7
TS28: cerebellum Present Widespread g01900_sj_g88_101_p7 , g01900_sj_g88_051_p7 , g01900_sj_g88_001_p7
TS28: cerebral cortex Present Widespread g01900_sj_g88_101_p7 , g01900_sj_g88_051_p7 , g01900_sj_g88_001_p7
TS28: choroid plexus Present Regionally restricted g01900_sj_g88_051_p7 , g01900_sj_g88_101_p7 , g01900_sj_g88_001_p7
TS28: hippocampus Present Widespread g01900_sj_g88_101_p7 , g01900_sj_g88_051_p7 , g01900_sj_g88_001_p7
TS28: hypothalamus Present Widespread g01900_sj_g88_001_p7 , g01900_sj_g88_101_p7 , g01900_sj_g88_051_p7
TS28: meninges Present Regionally restricted g01900_sj_g88_001_p7 , g01900_sj_g88_101_p7 , g01900_sj_g88_051_p7
TS28: midbrain Present Widespread g01900_sj_g88_101_p7 , g01900_sj_g88_051_p7 , g01900_sj_g88_001_p7
TS28: main olfactory bulb Present Widespread g01900_sj_g88_001_p7 , g01900_sj_g88_051_p7 , g01900_sj_g88_101_p7
TS28: retina Present Regionally restricted g01900_sj_g88_101_p7 , g01900_sj_g88_001_p7 , g01900_sj_g88_051_p7
TS28: spinal cord Present Widespread g01900_sj_g88_101_p7 , g01900_sj_g88_001_p7 , g01900_sj_g88_051_p7
TS28: thalamus Present Widespread g01900_sj_g88_101_p7 , g01900_sj_g88_001_p7 , g01900_sj_g88_051_p7
Specimen g01900 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01900_sj_g87_003_adc , g01900_sj_g87_053_adc , g01900_sj_g101_012_ads , g01900_sj_g101_112_ads , g01900_sj_g101_062_ads
TS28: basal ganglia Present Widespread g01900_sj_g87_003_adc , g01900_sj_g101_062_ads , g01900_sj_g87_053_adc , g01900_sj_g101_012_ads , g01900_sj_g101_112_ads
TS28: brainstem Present Widespread g01900_sj_g101_012_ads , g01900_sj_g101_062_ads , g01900_sj_g87_053_adc , g01900_sj_g101_112_ads , g01900_sj_g87_003_adc
TS28: cerebellum Present Regionally restricted g01900_sj_g101_112_ads , g01900_sj_g87_003_adc , g01900_sj_g87_053_adc , g01900_sj_g101_062_ads , g01900_sj_g101_012_ads Expression was region specific and scattered.
TS28: cerebral cortex Present Widespread g01900_sj_g101_112_ads , g01900_sj_g101_012_ads , g01900_sj_g101_062_ads , g01900_sj_g87_053_adc , g01900_sj_g87_003_adc
TS28: choroid plexus Present Regionally restricted g01900_sj_g87_003_adc , g01900_sj_g101_112_ads , g01900_sj_g101_012_ads , g01900_sj_g87_053_adc , g01900_sj_g101_062_ads
TS28: hippocampus Present Widespread g01900_sj_g101_112_ads , g01900_sj_g87_053_adc , g01900_sj_g101_012_ads , g01900_sj_g87_003_adc , g01900_sj_g101_062_ads
TS28: hypothalamus Present Widespread g01900_sj_g101_012_ads , g01900_sj_g101_112_ads , g01900_sj_g87_053_adc , g01900_sj_g101_062_ads , g01900_sj_g87_003_adc
TS28: meninges Present Regionally restricted g01900_sj_g101_012_ads , g01900_sj_g87_003_adc , g01900_sj_g101_062_ads , g01900_sj_g87_053_adc , g01900_sj_g101_112_ads
TS28: midbrain Present Widespread g01900_sj_g87_003_adc , g01900_sj_g101_012_ads , g01900_sj_g101_062_ads , g01900_sj_g101_112_ads , g01900_sj_g87_053_adc
TS28: main olfactory bulb Present Widespread g01900_sj_g87_003_adc , g01900_sj_g101_012_ads , g01900_sj_g101_062_ads , g01900_sj_g101_112_ads , g01900_sj_g87_053_adc
TS28: retina Present Regionally restricted g01900_sj_g101_112_ads , g01900_sj_g101_012_ads , g01900_sj_g87_053_adc , g01900_sj_g101_062_ads , g01900_sj_g87_003_adc
TS28: spinal cord Present Widespread g01900_sj_g87_053_adc , g01900_sj_g87_003_adc , g01900_sj_g101_112_ads , g01900_sj_g101_012_ads , g01900_sj_g101_062_ads
TS28: thalamus Present Widespread g01900_sj_g101_012_ads , g01900_sj_g87_003_adc , g01900_sj_g101_112_ads , g01900_sj_g87_053_adc , g01900_sj_g101_062_ads
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory