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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4945854
Gene symbol: Htr1f
Gene name: 5-hydroxytryptamine (serotonin) receptor 1F
Probe: g01842
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g01842 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Widespread g01842_sj_g81_019_e11 , g01842_sj_g81_069_e11
TS19: midbrain Present Widespread g01842_sj_g81_019_e11 , g01842_sj_g81_069_e11
TS19: hindbrain Present Widespread g01842_sj_g81_019_e11 , g01842_sj_g81_069_e11
TS19: future spinal cord Present Widespread g01842_sj_g81_019_e11 , g01842_sj_g81_069_e11
TS19: telencephalon Present Widespread g01842_sj_g81_019_e11 , g01842_sj_g81_069_e11
Specimen g01842 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Widespread g01842_sj_g79_019_e15 , g01842_sj_g79_069_e15 , g01842_sj_g79_119_e15
TS23: ganglionic eminence Present Widespread g01842_sj_g79_069_e15 , g01842_sj_g79_119_e15 , g01842_sj_g79_019_e15
TS23: hindbrain Present Widespread g01842_sj_g79_019_e15 , g01842_sj_g79_069_e15 , g01842_sj_g79_119_e15
TS23: hippocampus Present Widespread g01842_sj_g79_069_e15 , g01842_sj_g79_119_e15 , g01842_sj_g79_019_e15
TS23: hypothalamus Present Widespread g01842_sj_g79_119_e15 , g01842_sj_g79_069_e15 , g01842_sj_g79_019_e15
TS23: midbrain Present Widespread g01842_sj_g79_019_e15 , g01842_sj_g79_119_e15 , g01842_sj_g79_069_e15
TS23: neocortex Present Widespread g01842_sj_g79_019_e15 , g01842_sj_g79_119_e15 , g01842_sj_g79_069_e15
TS23: main olfactory bulb Present Widespread g01842_sj_g79_019_e15 , g01842_sj_g79_069_e15 , g01842_sj_g79_119_e15
TS23: retina Present Widespread g01842_sj_g79_119_e15 , g01842_sj_g79_069_e15 , g01842_sj_g79_019_e15
TS23: spinal cord Present Widespread g01842_sj_g79_069_e15 , g01842_sj_g79_019_e15 , g01842_sj_g79_119_e15
Specimen g01842 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01842_sj_g86_119_p7 , g01842_sj_g86_069_p7 , g01842_sj_g86_019_p7
TS28: basal ganglia Present Regionally restricted g01842_sj_g86_119_p7 , g01842_sj_g86_019_p7 , g01842_sj_g86_069_p7 Expression was region specific and scattered.
TS28: brainstem Present Scattered g01842_sj_g86_019_p7 , g01842_sj_g86_069_p7 , g01842_sj_g86_119_p7
TS28: cerebellum Present Regionally restricted g01842_sj_g86_019_p7 , g01842_sj_g86_069_p7 , g01842_sj_g86_119_p7 Expression was region specific and scattered.
TS28: choroid plexus Present Regionally restricted g01842_sj_g86_069_p7 , g01842_sj_g86_119_p7 , g01842_sj_g86_019_p7
TS28: hippocampus Present Regionally restricted g01842_sj_g86_069_p7 , g01842_sj_g86_019_p7 , g01842_sj_g86_119_p7 Expression was region specific and scattered.
TS28: hypothalamus Present Widespread g01842_sj_g86_069_p7 , g01842_sj_g86_019_p7 , g01842_sj_g86_119_p7
TS28: meninges Present Regionally restricted g01842_sj_g86_069_p7 , g01842_sj_g86_019_p7 , g01842_sj_g86_119_p7
TS28: midbrain Present Widespread g01842_sj_g86_019_p7 , g01842_sj_g86_069_p7 , g01842_sj_g86_119_p7
TS28: main olfactory bulb Present Regionally restricted g01842_sj_g86_069_p7 , g01842_sj_g86_119_p7 , g01842_sj_g86_019_p7 Expression was region specific and scattered.
TS28: spinal cord Present Widespread g01842_sj_g86_069_p7 , g01842_sj_g86_119_p7 , g01842_sj_g86_019_p7
TS28: thalamus Present Widespread g01842_sj_g86_119_p7 , g01842_sj_g86_069_p7 , g01842_sj_g86_019_p7
TS28: retina Strong Regionally restricted g01842_sj_g86_119_p7 , g01842_sj_g86_019_p7 , g01842_sj_g86_069_p7 Expression was region specific and scattered.
TS28: cerebral cortex Strong g01842_sj_g86_069_p7 , g01842_sj_g86_119_p7 , g01842_sj_g86_019_p7
Specimen g01842 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01842_sj_g82_019_ads , g01842_sj_g86_019_adc , g01842_sj_g82_069_ads , g01842_sj_g86_069_adc , g01842_sj_g82_119_ads
TS28: basal ganglia Present Widespread g01842_sj_g82_019_ads , g01842_sj_g82_119_ads , g01842_sj_g86_019_adc , g01842_sj_g86_069_adc , g01842_sj_g82_069_ads
TS28: brainstem Present Widespread g01842_sj_g82_019_ads , g01842_sj_g82_119_ads , g01842_sj_g82_069_ads , g01842_sj_g86_069_adc , g01842_sj_g86_019_adc
TS28: cerebral cortex Present Widespread g01842_sj_g86_019_adc , g01842_sj_g82_119_ads , g01842_sj_g86_069_adc , g01842_sj_g82_069_ads , g01842_sj_g82_019_ads
TS28: hypothalamus Present Widespread g01842_sj_g82_019_ads , g01842_sj_g86_069_adc , g01842_sj_g86_019_adc , g01842_sj_g82_119_ads , g01842_sj_g82_069_ads
TS28: midbrain Present Widespread g01842_sj_g82_019_ads , g01842_sj_g82_119_ads , g01842_sj_g82_069_ads , g01842_sj_g86_069_adc , g01842_sj_g86_019_adc
TS28: spinal cord Present Widespread g01842_sj_g82_119_ads , g01842_sj_g86_069_adc , g01842_sj_g82_019_ads , g01842_sj_g86_019_adc , g01842_sj_g82_069_ads
TS28: thalamus Present Widespread g01842_sj_g82_119_ads , g01842_sj_g86_019_adc , g01842_sj_g82_069_ads , g01842_sj_g82_019_ads , g01842_sj_g86_069_adc
TS28: cerebellum Strong Regionally restricted g01842_sj_g86_019_adc , g01842_sj_g82_119_ads , g01842_sj_g86_069_adc , g01842_sj_g82_069_ads , g01842_sj_g82_019_ads Expression was region specific and scattered.
TS28: hippocampus Strong Regionally restricted g01842_sj_g82_119_ads , g01842_sj_g82_069_ads , g01842_sj_g82_019_ads , g01842_sj_g86_069_adc , g01842_sj_g86_019_adc Expression was region specific and scattered.
TS28: meninges Strong Regionally restricted g01842_sj_g82_069_ads , g01842_sj_g86_019_adc , g01842_sj_g86_069_adc , g01842_sj_g82_119_ads , g01842_sj_g82_019_ads Expression was region specific and scattered.
TS28: main olfactory bulb Strong Widespread g01842_sj_g86_069_adc , g01842_sj_g82_069_ads , g01842_sj_g86_019_adc , g01842_sj_g82_119_ads , g01842_sj_g82_019_ads
TS28: retina Strong Regionally restricted g01842_sj_g82_069_ads , g01842_sj_g86_069_adc , g01842_sj_g86_019_adc , g01842_sj_g82_119_ads , g01842_sj_g82_019_ads Expression was region specific and scattered.
TS28: choroid plexus Present g01842_sj_g86_069_adc , g01842_sj_g82_069_ads , g01842_sj_g86_019_adc , g01842_sj_g82_019_ads , g01842_sj_g82_119_ads
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
MGI 6.23 		The Jackson Laboratory