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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4945815
Gene symbol: Ccr6
Gene name: C-C motif chemokine receptor 6
Probe: g01608
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g01608 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Widespread g01608_sj_g76_031_e11 , g01608_sj_g76_081_e11
TS19: hindbrain Present Widespread g01608_sj_g76_031_e11 , g01608_sj_g76_081_e11
TS19: future spinal cord Present Widespread g01608_sj_g76_081_e11 , g01608_sj_g76_031_e11
TS19: telencephalon Present Widespread g01608_sj_g76_081_e11 , g01608_sj_g76_031_e11
TS19: midbrain Strong Regionally restricted g01608_sj_g76_031_e11 , g01608_sj_g76_081_e11 Expression was region specific and scattered.
Specimen g01608 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Widespread g01608_sj_g75_083_e15 , g01608_sj_g75_033_e15 , g01608_sj_g75_133_e15
TS23: ganglionic eminence Present Widespread g01608_sj_g75_133_e15 , g01608_sj_g75_083_e15 , g01608_sj_g75_033_e15
TS23: hippocampus Present Widespread g01608_sj_g75_133_e15 , g01608_sj_g75_083_e15 , g01608_sj_g75_033_e15
TS23: hypothalamus Present Widespread g01608_sj_g75_033_e15 , g01608_sj_g75_133_e15 , g01608_sj_g75_083_e15
TS23: midbrain Present Widespread g01608_sj_g75_033_e15 , g01608_sj_g75_083_e15 , g01608_sj_g75_133_e15
TS23: neocortex Present Widespread g01608_sj_g75_083_e15 , g01608_sj_g75_033_e15 , g01608_sj_g75_133_e15
TS23: main olfactory bulb Present Widespread g01608_sj_g75_133_e15 , g01608_sj_g75_083_e15 , g01608_sj_g75_033_e15
TS23: retina Present Regionally restricted g01608_sj_g75_083_e15 , g01608_sj_g75_133_e15 , g01608_sj_g75_033_e15
TS23: spinal cord Present Widespread g01608_sj_g75_083_e15 , g01608_sj_g75_133_e15 , g01608_sj_g75_033_e15
TS23: hindbrain Strong Regionally restricted g01608_sj_g75_083_e15 , g01608_sj_g75_033_e15 , g01608_sj_g75_133_e15 Expression was region specific and scattered.
Specimen g01608 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01608_sj_g79_148_p7 , g01608_sj_g79_048_p7 , g01608_sj_g79_098_p7
TS28: basal ganglia Present Widespread g01608_sj_g79_098_p7 , g01608_sj_g79_148_p7 , g01608_sj_g79_048_p7
TS28: cerebellum Present Widespread g01608_sj_g79_048_p7 , g01608_sj_g79_148_p7 , g01608_sj_g79_098_p7
TS28: cerebral cortex Present Widespread g01608_sj_g79_098_p7 , g01608_sj_g79_048_p7 , g01608_sj_g79_148_p7
TS28: choroid plexus Present Regionally restricted g01608_sj_g79_148_p7 , g01608_sj_g79_098_p7 , g01608_sj_g79_048_p7
TS28: hippocampus Present Widespread g01608_sj_g79_098_p7 , g01608_sj_g79_148_p7 , g01608_sj_g79_048_p7
TS28: hypothalamus Present Widespread g01608_sj_g79_048_p7 , g01608_sj_g79_148_p7 , g01608_sj_g79_098_p7
TS28: meninges Present Regionally restricted g01608_sj_g79_148_p7 , g01608_sj_g79_098_p7 , g01608_sj_g79_048_p7
TS28: midbrain Present Widespread g01608_sj_g79_148_p7 , g01608_sj_g79_098_p7 , g01608_sj_g79_048_p7
TS28: main olfactory bulb Present Widespread g01608_sj_g79_048_p7 , g01608_sj_g79_148_p7 , g01608_sj_g79_098_p7
TS28: retina Present Regionally restricted g01608_sj_g79_048_p7 , g01608_sj_g79_148_p7 , g01608_sj_g79_098_p7
TS28: spinal cord Present Widespread g01608_sj_g79_098_p7 , g01608_sj_g79_048_p7 , g01608_sj_g79_148_p7
TS28: brainstem Strong Regionally restricted g01608_sj_g79_098_p7 , g01608_sj_g79_048_p7 , g01608_sj_g79_148_p7 Expression was region specific and scattered.
TS28: thalamus Strong Regionally restricted g01608_sj_g79_148_p7 , g01608_sj_g79_048_p7 , g01608_sj_g79_098_p7 Expression was region specific and scattered.
Specimen g01608 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01608_sj_g77_003_ads , g01608_sj_g77_053_ads , g01608_sj_g92_034_adc , g01608_sj_g92_084_adc , g01608_sj_g77_103_ads
TS28: basal ganglia Present Widespread g01608_sj_g92_034_adc , g01608_sj_g77_103_ads , g01608_sj_g92_084_adc , g01608_sj_g77_003_ads , g01608_sj_g77_053_ads
TS28: cerebellum Present Regionally restricted g01608_sj_g92_034_adc , g01608_sj_g77_103_ads , g01608_sj_g92_084_adc , g01608_sj_g77_053_ads , g01608_sj_g77_003_ads Expression was region specific and scattered.
TS28: cerebral cortex Present Widespread g01608_sj_g92_084_adc , g01608_sj_g77_003_ads , g01608_sj_g77_103_ads , g01608_sj_g92_034_adc , g01608_sj_g77_053_ads
TS28: choroid plexus Present Regionally restricted g01608_sj_g77_003_ads , g01608_sj_g77_103_ads , g01608_sj_g92_034_adc , g01608_sj_g92_084_adc , g01608_sj_g77_053_ads
TS28: hippocampus Present Widespread g01608_sj_g77_103_ads , g01608_sj_g92_034_adc , g01608_sj_g92_084_adc , g01608_sj_g77_003_ads , g01608_sj_g77_053_ads
TS28: hypothalamus Present Widespread g01608_sj_g77_003_ads , g01608_sj_g92_034_adc , g01608_sj_g77_053_ads , g01608_sj_g92_084_adc , g01608_sj_g77_103_ads
TS28: midbrain Present Widespread g01608_sj_g92_084_adc , g01608_sj_g77_003_ads , g01608_sj_g92_034_adc , g01608_sj_g77_053_ads , g01608_sj_g77_103_ads
TS28: main olfactory bulb Present Widespread g01608_sj_g77_103_ads , g01608_sj_g77_053_ads , g01608_sj_g77_003_ads , g01608_sj_g92_084_adc , g01608_sj_g92_034_adc
TS28: retina Present Regionally restricted g01608_sj_g92_084_adc , g01608_sj_g92_034_adc , g01608_sj_g77_103_ads , g01608_sj_g77_003_ads , g01608_sj_g77_053_ads
TS28: spinal cord Present Widespread g01608_sj_g77_003_ads , g01608_sj_g92_034_adc , g01608_sj_g77_103_ads , g01608_sj_g77_053_ads , g01608_sj_g92_084_adc
TS28: brainstem Strong Regionally restricted g01608_sj_g92_034_adc , g01608_sj_g92_084_adc , g01608_sj_g77_103_ads , g01608_sj_g77_053_ads , g01608_sj_g77_003_ads Expression was region specific and scattered.
TS28: thalamus Strong Widespread g01608_sj_g92_084_adc , g01608_sj_g77_103_ads , g01608_sj_g77_003_ads , g01608_sj_g77_053_ads , g01608_sj_g92_034_adc
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
MGI 6.23 		The Jackson Laboratory