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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4944862
Gene symbol: Pax6
Gene name: paired box 6
Probe: g00294
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g00294 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: hindbrain Present Widespread g00294_sj_g62_011_e11 , g00294_sj_g62_061_e11
TS19: diencephalon Strong Regionally restricted g00294_sj_g62_061_e11 , g00294_sj_g62_011_e11 Expression was region specific and scattered.
TS19: midbrain Strong Regionally restricted g00294_sj_g62_011_e11 , g00294_sj_g62_061_e11 Expression was region specific and scattered.
TS19: future spinal cord Strong Regionally restricted g00294_sj_g62_011_e11 , g00294_sj_g62_061_e11 Expression was region specific and scattered.
TS19: telencephalon Strong Regionally restricted g00294_sj_g62_061_e11 , g00294_sj_g62_011_e11 Expression was region specific and scattered.
Specimen g00294 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: ganglionic eminence Present Regionally restricted g00294_sj_g62_111_e15 , g00294_sj_g62_061_e15 , g00294_sj_g62_011_e15 Expression was region specific and scattered.
TS23: hippocampus Present Regionally restricted g00294_sj_g62_011_e15 , g00294_sj_g62_111_e15 , g00294_sj_g62_061_e15 Expression was region specific and scattered.
TS23: hypothalamus Present Widespread g00294_sj_g62_011_e15 , g00294_sj_g62_111_e15 , g00294_sj_g62_061_e15
TS23: midbrain Present Regionally restricted g00294_sj_g62_111_e15 , g00294_sj_g62_061_e15 , g00294_sj_g62_011_e15 Expression was region specific and scattered.
TS23: main olfactory bulb Present Regionally restricted g00294_sj_g62_061_e15 , g00294_sj_g62_111_e15 , g00294_sj_g62_011_e15 Expression was region specific and scattered.
TS23: spinal cord Present Regionally restricted g00294_sj_g62_011_e15 , g00294_sj_g62_061_e15 , g00294_sj_g62_111_e15 Expression was region specific and scattered.
TS23: cerebellum Strong Regionally restricted g00294_sj_g62_011_e15 , g00294_sj_g62_061_e15 , g00294_sj_g62_111_e15 Expression was region specific and scattered.
TS23: hindbrain Strong Regionally restricted g00294_sj_g62_061_e15 , g00294_sj_g62_011_e15 , g00294_sj_g62_111_e15 Expression was region specific and scattered.
TS23: neocortex Strong Regionally restricted g00294_sj_g62_111_e15 , g00294_sj_g62_061_e15 , g00294_sj_g62_011_e15 Expression was region specific and scattered.
TS23: retina Strong Regionally restricted g00294_sj_g62_061_e15 , g00294_sj_g62_011_e15 , g00294_sj_g62_111_e15
Specimen g00294 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Regionally restricted g00294_sj_g62_011_p7 , g00294_sj_g62_111_p7 , g00294_sj_g62_061_p7 Expression was region specific and scattered.
TS28: basal ganglia Present Widespread g00294_sj_g62_011_p7 , g00294_sj_g62_111_p7 , g00294_sj_g62_061_p7
TS28: brainstem Present Regionally restricted g00294_sj_g62_011_p7 , g00294_sj_g62_061_p7 , g00294_sj_g62_111_p7 Expression was region specific and scattered.
TS28: cerebral cortex Present Widespread g00294_sj_g62_111_p7 , g00294_sj_g62_061_p7 , g00294_sj_g62_011_p7
TS28: hippocampus Present Widespread g00294_sj_g62_011_p7 , g00294_sj_g62_111_p7 , g00294_sj_g62_061_p7
TS28: hypothalamus Present Widespread g00294_sj_g62_061_p7 , g00294_sj_g62_111_p7 , g00294_sj_g62_011_p7
TS28: meninges Present Regionally restricted g00294_sj_g62_061_p7 , g00294_sj_g62_011_p7 , g00294_sj_g62_111_p7
TS28: midbrain Present Regionally restricted g00294_sj_g62_111_p7 , g00294_sj_g62_061_p7 , g00294_sj_g62_011_p7 Expression was region specific and scattered.
TS28: main olfactory bulb Present Regionally restricted g00294_sj_g62_011_p7 , g00294_sj_g62_061_p7 , g00294_sj_g62_111_p7 Expression was region specific and scattered.
TS28: spinal cord Present Widespread g00294_sj_g62_011_p7 , g00294_sj_g62_111_p7 , g00294_sj_g62_061_p7
TS28: thalamus Present Regionally restricted g00294_sj_g62_111_p7 , g00294_sj_g62_061_p7 , g00294_sj_g62_011_p7 Expression was region specific and scattered.
TS28: cerebellum Strong Regionally restricted g00294_sj_g62_111_p7 , g00294_sj_g62_011_p7 , g00294_sj_g62_061_p7 Expression was region specific and scattered.
TS28: retina Strong Regionally restricted g00294_sj_g62_011_p7 , g00294_sj_g62_061_p7 , g00294_sj_g62_111_p7
TS28: choroid plexus Absent g00294_sj_g62_011_p7 , g00294_sj_g62_111_p7 , g00294_sj_g62_061_p7
Specimen g00294 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Regionally restricted g00294_sj_g61_061_ads , g00294_sj_g61_011_adc , g00294_sj_g61_111_ads , g00294_sj_g61_011_ads , g00294_sj_g61_061_adc Expression was region specific and scattered.
TS28: basal ganglia Present Widespread g00294_sj_g61_011_ads , g00294_sj_g61_061_adc , g00294_sj_g61_061_ads , g00294_sj_g61_111_ads , g00294_sj_g61_011_adc
TS28: brainstem Present Widespread g00294_sj_g61_011_ads , g00294_sj_g61_011_adc , g00294_sj_g61_111_ads , g00294_sj_g61_061_ads , g00294_sj_g61_061_adc
TS28: cerebellum Present Regionally restricted g00294_sj_g61_011_adc , g00294_sj_g61_011_ads , g00294_sj_g61_111_ads , g00294_sj_g61_061_ads , g00294_sj_g61_061_adc Expression was region specific and scattered.
TS28: cerebral cortex Present Regionally restricted g00294_sj_g61_061_adc , g00294_sj_g61_061_ads , g00294_sj_g61_111_ads , g00294_sj_g61_011_ads , g00294_sj_g61_011_adc Expression was region specific and scattered.
TS28: main olfactory bulb Present Regionally restricted g00294_sj_g61_011_adc , g00294_sj_g61_011_ads , g00294_sj_g61_111_ads , g00294_sj_g61_061_ads , g00294_sj_g61_061_adc Expression was region specific and scattered.
TS28: thalamus Present Regionally restricted g00294_sj_g61_061_ads , g00294_sj_g61_011_ads , g00294_sj_g61_011_adc , g00294_sj_g61_061_adc , g00294_sj_g61_111_ads Expression was region specific and scattered.
TS28: retina Strong Regionally restricted g00294_sj_g61_061_adc , g00294_sj_g61_111_ads , g00294_sj_g61_011_ads , g00294_sj_g61_011_adc , g00294_sj_g61_061_ads
TS28: choroid plexus Absent g00294_sj_g61_011_ads , g00294_sj_g61_011_adc , g00294_sj_g61_061_ads , g00294_sj_g61_061_adc , g00294_sj_g61_111_ads
TS28: hippocampus Absent g00294_sj_g61_011_ads , g00294_sj_g61_061_adc , g00294_sj_g61_061_ads , g00294_sj_g61_011_adc , g00294_sj_g61_111_ads
TS28: hypothalamus Absent g00294_sj_g61_111_ads , g00294_sj_g61_061_ads , g00294_sj_g61_011_adc , g00294_sj_g61_061_adc , g00294_sj_g61_011_ads
TS28: meninges Absent g00294_sj_g61_061_adc , g00294_sj_g61_011_adc , g00294_sj_g61_061_ads , g00294_sj_g61_011_ads , g00294_sj_g61_111_ads
TS28: midbrain Absent g00294_sj_g61_011_adc , g00294_sj_g61_061_adc , g00294_sj_g61_111_ads , g00294_sj_g61_011_ads , g00294_sj_g61_061_ads
TS28: spinal cord Absent g00294_sj_g61_011_ads , g00294_sj_g61_061_ads , g00294_sj_g61_011_adc , g00294_sj_g61_111_ads , g00294_sj_g61_061_adc
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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01/28/2026
MGI 6.24 		The Jackson Laboratory