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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827461
Gene symbol: Prune2
Gene name: prune homolog 2
Probe: IMAGE clone 6848636
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011113_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_011113_01
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_01
TS23: diaphragm Strong Regionally restricted euxassay_011113_01
TS23: hand Strong Regionally restricted euxassay_011113_01
TS23: upper leg muscle Strong Regionally restricted euxassay_011113_01
Specimen euxassay_011113_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_011113_02
TS23: stomach Moderate Regionally restricted euxassay_011113_02
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_02
TS23: diaphragm Strong Regionally restricted euxassay_011113_02
TS23: upper leg muscle Strong Regionally restricted euxassay_011113_02
Specimen euxassay_011113_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011113_03
TS23: neural retina Strong Regionally restricted euxassay_011113_03
TS23: stomach Moderate Regionally restricted euxassay_011113_03
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_03
TS23: diaphragm Strong Regionally restricted euxassay_011113_03
TS23: upper leg muscle Strong Regionally restricted euxassay_011113_03
Specimen euxassay_011113_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011113_04
TS23: neural retina Strong Regionally restricted euxassay_011113_04
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011113_04
TS23: stomach Moderate Regionally restricted euxassay_011113_04
TS23: diaphragm Moderate Regionally restricted euxassay_011113_04
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_011113_04
TS23: upper leg muscle Strong Regionally restricted euxassay_011113_04
Specimen euxassay_011113_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011113_05
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011113_05
TS23: facial ganglion Strong Regionally restricted euxassay_011113_05
TS23: stomach Moderate Regionally restricted euxassay_011113_05
TS23: diaphragm Strong Regionally restricted euxassay_011113_05
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_05
TS23: upper arm muscle Strong Regionally restricted euxassay_011113_05
TS23: upper leg muscle Strong Regionally restricted euxassay_011113_05
Specimen euxassay_011113_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Spotted euxassay_011113_06
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011113_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011113_06
TS23: facial ganglion Strong Regionally restricted euxassay_011113_06
TS23: stomach Strong Regionally restricted euxassay_011113_06
TS23: diaphragm Strong Regionally restricted euxassay_011113_06
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_06
TS23: upper arm muscle Strong Regionally restricted euxassay_011113_06
TS23: upper leg muscle Strong Regionally restricted euxassay_011113_06
Specimen euxassay_011113_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Regionally restricted euxassay_011113_07
TS23: rest of cerebellum mantle layer Strong Spotted euxassay_011113_07
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011113_07
TS23: midbrain mantle layer Strong Single cells euxassay_011113_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011113_07
TS23: facial ganglion Strong Regionally restricted euxassay_011113_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011113_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011113_07
TS23: stomach Strong Regionally restricted euxassay_011113_07
TS23: diaphragm Strong Regionally restricted euxassay_011113_07
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_07
TS23: upper leg muscle Strong Regionally restricted euxassay_011113_07
Specimen euxassay_011113_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Regionally restricted euxassay_011113_08
TS23: rest of cerebellum mantle layer Strong Spotted euxassay_011113_08
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011113_08
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_011113_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011113_08
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011113_08
TS23: facial ganglion Strong Regionally restricted euxassay_011113_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011113_08
TS23: stomach Strong Regionally restricted euxassay_011113_08
TS23: midgut Strong Regionally restricted euxassay_011113_08
TS23: diaphragm Strong Regionally restricted euxassay_011113_08
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_08
Specimen euxassay_011113_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011113_09
TS23: rest of cerebellum mantle layer Strong Spotted euxassay_011113_09
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011113_09
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_011113_09
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011113_09
TS23: vagus ganglion Strong Regionally restricted euxassay_011113_09
TS23: olfactory epithelium Strong Regionally restricted euxassay_011113_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011113_09
TS23: midgut Strong Regionally restricted euxassay_011113_09
TS23: stomach Strong Regionally restricted euxassay_011113_09
TS23: adrenal medulla Strong Regionally restricted euxassay_011113_09
TS23: diaphragm Strong Regionally restricted euxassay_011113_09
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_09
Specimen euxassay_011113_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011113_10
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011113_10
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011113_10
TS23: trigeminal nerve Strong Regionally restricted euxassay_011113_10
TS23: vestibulo-cochlear ganglion Strong Single cells euxassay_011113_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_011113_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011113_10
TS23: stomach Strong Regionally restricted euxassay_011113_10
TS23: midgut Strong Regionally restricted euxassay_011113_10
TS23: adrenal medulla Strong Regionally restricted euxassay_011113_10
TS23: diaphragm Strong Regionally restricted euxassay_011113_10
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_10
Specimen euxassay_011113_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011113_11
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011113_11
TS23: midbrain tegmentum Strong Single cells euxassay_011113_11
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_011113_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_011113_11
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_011113_11
TS23: tongue muscle Strong Regionally restricted euxassay_011113_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011113_11
TS23: midgut Strong Regionally restricted euxassay_011113_11
TS23: adrenal medulla Strong Regionally restricted euxassay_011113_11
TS23: diaphragm Strong Regionally restricted euxassay_011113_11
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_11
Specimen euxassay_011113_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011113_12
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_011113_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_011113_12
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_011113_12
TS23: tongue muscle Strong Regionally restricted euxassay_011113_12
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011113_12
TS23: ventral grey horn Strong Regionally restricted euxassay_011113_12
TS23: midgut Strong Regionally restricted euxassay_011113_12
TS23: diaphragm Strong Regionally restricted euxassay_011113_12
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_12
TS23: tail paraxial mesenchyme Strong Regionally restricted euxassay_011113_12
Specimen euxassay_011113_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon floor plate Strong Regionally restricted euxassay_011113_13
TS23: medulla oblongata floor plate Strong Regionally restricted euxassay_011113_13
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_011113_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_011113_13
TS23: vomeronasal organ Strong Regionally restricted euxassay_011113_13
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_011113_13
TS23: tongue muscle Strong Regionally restricted euxassay_011113_13
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011113_13
TS23: ventral grey horn Strong Regionally restricted euxassay_011113_13
TS23: midgut Strong Regionally restricted euxassay_011113_13
TS23: diaphragm Strong Regionally restricted euxassay_011113_13
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_13
TS23: thymus primordium Strong Regionally restricted euxassay_011113_13
TS23: tail paraxial mesenchyme Strong Regionally restricted euxassay_011113_13
Specimen euxassay_011113_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata floor plate Strong Regionally restricted euxassay_011113_14
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_011113_14
TS23: tongue muscle Strong Regionally restricted euxassay_011113_14
TS23: ventral grey horn Strong Regionally restricted euxassay_011113_14
TS23: esophagus Moderate Regionally restricted euxassay_011113_14
TS23: midgut Strong Regionally restricted euxassay_011113_14
TS23: diaphragm Strong Regionally restricted euxassay_011113_14
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_14
TS23: thymus primordium Strong Regionally restricted euxassay_011113_14
TS23: tail paraxial mesenchyme Strong Regionally restricted euxassay_011113_14
Specimen euxassay_011113_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_011113_15
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_011113_15
TS23: tongue muscle Strong Regionally restricted euxassay_011113_15
TS23: ventral grey horn Strong Regionally restricted euxassay_011113_15
TS23: esophagus Moderate Regionally restricted euxassay_011113_15
TS23: midgut Strong Regionally restricted euxassay_011113_15
TS23: diaphragm Strong Regionally restricted euxassay_011113_15
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_15
TS23: thymus primordium Strong Regionally restricted euxassay_011113_15
TS23: tail paraxial mesenchyme Strong Regionally restricted euxassay_011113_15
Specimen euxassay_011113_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_011113_16
TS23: vomeronasal organ Strong Regionally restricted euxassay_011113_16
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_011113_16
TS23: tongue muscle Strong Regionally restricted euxassay_011113_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011113_16
TS23: ventral grey horn Strong Regionally restricted euxassay_011113_16
TS23: midgut Strong Regionally restricted euxassay_011113_16
TS23: diaphragm Strong Regionally restricted euxassay_011113_16
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_16
TS23: thymus primordium Strong Regionally restricted euxassay_011113_16
TS23: tail paraxial mesenchyme Strong Regionally restricted euxassay_011113_16
Specimen euxassay_011113_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011113_17
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011113_17
TS23: midbrain mantle layer Strong Single cells euxassay_011113_17
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_011113_17
TS23: olfactory epithelium Strong Regionally restricted euxassay_011113_17
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_011113_17
TS23: tongue muscle Strong Regionally restricted euxassay_011113_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011113_17
TS23: ventral grey horn Strong Regionally restricted euxassay_011113_17
TS23: midgut Strong Regionally restricted euxassay_011113_17
TS23: diaphragm Strong Regionally restricted euxassay_011113_17
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_17
TS23: thymus primordium Moderate Regionally restricted euxassay_011113_17
Specimen euxassay_011113_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011113_18
TS23: rest of cerebellum mantle layer Strong Spotted euxassay_011113_18
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011113_18
TS23: midbrain mantle layer Strong Single cells euxassay_011113_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011113_18
TS23: trigeminal nerve Strong Regionally restricted euxassay_011113_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011113_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_011113_18
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_011113_18
TS23: tongue muscle Strong Regionally restricted euxassay_011113_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011113_18
TS23: ventral grey horn Strong Regionally restricted euxassay_011113_18
TS23: midgut Strong Regionally restricted euxassay_011113_18
TS23: diaphragm Strong Regionally restricted euxassay_011113_18
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_18
Specimen euxassay_011113_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Regionally restricted euxassay_011113_19
TS23: rest of cerebellum mantle layer Strong Spotted euxassay_011113_19
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011113_19
TS23: midbrain mantle layer Strong Single cells euxassay_011113_19
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_011113_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011113_19
TS23: vagus ganglion Strong Regionally restricted euxassay_011113_19
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011113_19
TS23: olfactory epithelium Strong Regionally restricted euxassay_011113_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011113_19
TS23: midgut Strong Regionally restricted euxassay_011113_19
TS23: adrenal medulla Strong Regionally restricted euxassay_011113_19
TS23: diaphragm Strong Regionally restricted euxassay_011113_19
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_19
Specimen euxassay_011113_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Regionally restricted euxassay_011113_20
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011113_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011113_20
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011113_20
TS23: facial ganglion Strong Regionally restricted euxassay_011113_20
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011113_20
TS23: midgut Strong Regionally restricted euxassay_011113_20
TS23: adrenal medulla Strong Regionally restricted euxassay_011113_20
TS23: diaphragm Strong Regionally restricted euxassay_011113_20
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_20
Specimen euxassay_011113_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011113_21
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011113_21
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011113_21
TS23: facial ganglion Strong Regionally restricted euxassay_011113_21
TS23: midgut Strong Regionally restricted euxassay_011113_21
TS23: diaphragm Strong Regionally restricted euxassay_011113_21
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_21
TS23: upper arm muscle Strong Regionally restricted euxassay_011113_21
TS23: upper leg muscle Strong Regionally restricted euxassay_011113_21
TS23: foot Strong Regionally restricted euxassay_011113_21
Specimen euxassay_011113_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011113_22
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011113_22
TS23: facial ganglion Strong Regionally restricted euxassay_011113_22
TS23: diaphragm Strong Regionally restricted euxassay_011113_22
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_22
TS23: upper arm muscle Strong Regionally restricted euxassay_011113_22
Specimen euxassay_011113_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011113_23
TS23: facial ganglion Strong Regionally restricted euxassay_011113_23
TS23: diaphragm Strong Regionally restricted euxassay_011113_23
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_23
TS23: upper arm muscle Strong Regionally restricted euxassay_011113_23
TS23: upper leg muscle Strong Regionally restricted euxassay_011113_23
Specimen euxassay_011113_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_011113_24
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011113_24
TS23: diaphragm Strong Regionally restricted euxassay_011113_24
TS23: vertebral axis musculature Strong Regionally restricted euxassay_011113_24
TS23: upper leg muscle Strong Regionally restricted euxassay_011113_24
TS23: lower leg rest of mesenchyme Strong Regionally restricted euxassay_011113_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory