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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827019
Gene symbol: Pabpc6
Gene name: poly(A) binding protein, cytoplasmic 6
Probe: T37409
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011207_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_01
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_01
Specimen euxassay_011207_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_02
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_02
TS23: stomach Moderate Regionally restricted euxassay_011207_02
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_02
Specimen euxassay_011207_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_03
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_03
TS23: vibrissa Weak Regionally restricted euxassay_011207_03
TS23: mandible Weak Regionally restricted euxassay_011207_03
TS23: stomach Moderate Regionally restricted euxassay_011207_03
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_03
Specimen euxassay_011207_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_04
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_04
TS23: vibrissa Moderate Regionally restricted euxassay_011207_04
TS23: mandible Weak Regionally restricted euxassay_011207_04
TS23: maxilla Weak Regionally restricted euxassay_011207_04
TS23: stomach Moderate Regionally restricted euxassay_011207_04
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_04
Specimen euxassay_011207_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_05
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_05
TS23: vibrissa Moderate Regionally restricted euxassay_011207_05
TS23: maxilla Weak Regionally restricted euxassay_011207_05
TS23: mandible Weak Regionally restricted euxassay_011207_05
TS23: lung Weak Regionally restricted euxassay_011207_05
TS23: stomach Moderate Regionally restricted euxassay_011207_05
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_05
Specimen euxassay_011207_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_06
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_06
TS23: vibrissa Weak Regionally restricted euxassay_011207_06
TS23: lower jaw molar Moderate Regionally restricted euxassay_011207_06
TS23: upper jaw molar Moderate Regionally restricted euxassay_011207_06
TS23: lung Weak Regionally restricted euxassay_011207_06
TS23: stomach Moderate Regionally restricted euxassay_011207_06
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_06
Specimen euxassay_011207_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_07
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_07
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011207_07
TS23: vibrissa Weak Regionally restricted euxassay_011207_07
TS23: mandible Weak Regionally restricted euxassay_011207_07
TS23: maxilla Weak Regionally restricted euxassay_011207_07
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011207_07
TS23: renal cortex Moderate Regionally restricted euxassay_011207_07
TS23: lung Weak Regionally restricted euxassay_011207_07
TS23: stomach Moderate Regionally restricted euxassay_011207_07
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_07
Specimen euxassay_011207_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_08
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_08
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011207_08
TS23: maxilla Weak Regionally restricted euxassay_011207_08
TS23: mandible Weak Regionally restricted euxassay_011207_08
TS23: olfactory epithelium Weak Regionally restricted euxassay_011207_08
TS23: renal cortex Moderate Regionally restricted euxassay_011207_08
TS23: lung Weak Regionally restricted euxassay_011207_08
TS23: stomach Moderate Regionally restricted euxassay_011207_08
TS23: midgut Moderate Regionally restricted euxassay_011207_08
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_08
Specimen euxassay_011207_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_09
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_09
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011207_09
TS23: mandible Weak Regionally restricted euxassay_011207_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_011207_09
TS23: renal cortex Moderate Regionally restricted euxassay_011207_09
TS23: lung Weak Regionally restricted euxassay_011207_09
TS23: midgut Moderate Regionally restricted euxassay_011207_09
TS23: stomach Moderate Regionally restricted euxassay_011207_09
TS23: pancreas Moderate Regionally restricted euxassay_011207_09
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_09
Specimen euxassay_011207_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_10
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_10
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011207_10
TS23: upper jaw incisor Weak Regionally restricted euxassay_011207_10
TS23: lower jaw incisor Weak Regionally restricted euxassay_011207_10
TS23: mandible Weak Regionally restricted euxassay_011207_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_011207_10
TS23: naris Weak Regionally restricted euxassay_011207_10
TS23: renal cortex Moderate Regionally restricted euxassay_011207_10
TS23: lung Weak Regionally restricted euxassay_011207_10
TS23: midgut Moderate Regionally restricted euxassay_011207_10
TS23: stomach Moderate Regionally restricted euxassay_011207_10
TS23: pancreas Moderate Regionally restricted euxassay_011207_10
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_011207_10
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_10
Specimen euxassay_011207_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_11
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_11
TS23: upper jaw incisor Weak Regionally restricted euxassay_011207_11
TS23: lower jaw incisor Weak Regionally restricted euxassay_011207_11
TS23: mandible Weak Regionally restricted euxassay_011207_11
TS23: vomeronasal organ Weak Regionally restricted euxassay_011207_11
TS23: olfactory epithelium Weak Regionally restricted euxassay_011207_11
TS23: naris Weak Regionally restricted euxassay_011207_11
TS23: renal cortex Moderate Regionally restricted euxassay_011207_11
TS23: lung Weak Regionally restricted euxassay_011207_11
TS23: midgut Moderate Regionally restricted euxassay_011207_11
TS23: pancreas Moderate Regionally restricted euxassay_011207_11
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_011207_11
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_11
Specimen euxassay_011207_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_12
TS23: thymus primordium Moderate Uniform euxassay_011207_12
TS23: thyroid gland Weak Regionally restricted euxassay_011207_12
TS23: lower jaw incisor Weak Regionally restricted euxassay_011207_12
TS23: olfactory epithelium Weak Regionally restricted euxassay_011207_12
TS23: lung Weak Regionally restricted euxassay_011207_12
TS23: midgut Weak Regionally restricted euxassay_011207_12
TS23: pancreas Moderate Regionally restricted euxassay_011207_12
TS23: pituitary gland Moderate Regionally restricted euxassay_011207_12
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_011207_12
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_12
Specimen euxassay_011207_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_13
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_13
TS23: thymus primordium Strong Uniform euxassay_011207_13
TS23: lung Weak Regionally restricted euxassay_011207_13
TS23: midgut Weak Regionally restricted euxassay_011207_13
TS23: hindgut Moderate Regionally restricted euxassay_011207_13
TS23: rectum Moderate Regionally restricted euxassay_011207_13
TS23: tongue muscle Moderate Regionally restricted euxassay_011207_13
TS23: esophagus Weak Regionally restricted euxassay_011207_13
TS23: urethra Weak Regionally restricted euxassay_011207_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: pituitary gland Moderate Regionally restricted euxassay_011207_13
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_011207_13
Specimen euxassay_011207_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_14
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_14
TS23: thymus primordium Strong Uniform euxassay_011207_14
TS23: vomeronasal organ Weak Regionally restricted euxassay_011207_14
TS23: naris Weak Regionally restricted euxassay_011207_14
TS23: olfactory epithelium Weak Regionally restricted euxassay_011207_14
TS23: lung Weak Regionally restricted euxassay_011207_14
TS23: hindgut Moderate Regionally restricted euxassay_011207_14
TS23: midgut Moderate Regionally restricted euxassay_011207_14
TS23: rectum Moderate Regionally restricted euxassay_011207_14
TS23: esophagus Weak Regionally restricted euxassay_011207_14
TS23: urethra Weak Regionally restricted euxassay_011207_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: pituitary gland Moderate Regionally restricted euxassay_011207_14
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_011207_14
Specimen euxassay_011207_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_15
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_15
TS23: thymus primordium Strong Uniform euxassay_011207_15
TS23: lower jaw incisor Weak Regionally restricted euxassay_011207_15
TS23: upper jaw incisor Weak Regionally restricted euxassay_011207_15
TS23: olfactory epithelium Weak Regionally restricted euxassay_011207_15
TS23: naris Weak Regionally restricted euxassay_011207_15
TS23: lung Weak Regionally restricted euxassay_011207_15
TS23: hindgut Moderate Regionally restricted euxassay_011207_15
TS23: midgut Moderate Regionally restricted euxassay_011207_15
TS23: pituitary gland Moderate Regionally restricted euxassay_011207_15
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_011207_15
Specimen euxassay_011207_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_16
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_16
TS23: thymus primordium Strong Uniform euxassay_011207_16
TS23: thyroid gland Moderate Regionally restricted euxassay_011207_16
TS23: upper jaw incisor Moderate Regionally restricted euxassay_011207_16
TS23: lower jaw incisor Moderate Regionally restricted euxassay_011207_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_011207_16
TS23: lung Weak Regionally restricted euxassay_011207_16
TS23: midgut Moderate Regionally restricted euxassay_011207_16
TS23: pancreas Moderate Regionally restricted euxassay_011207_16
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_011207_16
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_16
Specimen euxassay_011207_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_17
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_17
TS23: thyroid gland Moderate Regionally restricted euxassay_011207_17
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011207_17
TS23: mandible Weak Regionally restricted euxassay_011207_17
TS23: maxilla Weak Regionally restricted euxassay_011207_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011207_17
TS23: renal cortex Moderate Regionally restricted euxassay_011207_17
TS23: lung Weak Regionally restricted euxassay_011207_17
TS23: midgut Moderate Regionally restricted euxassay_011207_17
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_011207_17
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_17
Specimen euxassay_011207_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_18
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_18
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011207_18
TS23: mandible Weak Regionally restricted euxassay_011207_18
TS23: maxilla Weak Regionally restricted euxassay_011207_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011207_18
TS23: renal cortex Moderate Regionally restricted euxassay_011207_18
TS23: lung Weak Regionally restricted euxassay_011207_18
TS23: midgut Moderate Regionally restricted euxassay_011207_18
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_011207_18
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_18
Specimen euxassay_011207_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_19
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_19
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011207_19
TS23: vibrissa Weak Regionally restricted euxassay_011207_19
TS23: upper jaw molar Weak Regionally restricted euxassay_011207_19
TS23: maxilla Weak Regionally restricted euxassay_011207_19
TS23: lower jaw molar Weak Regionally restricted euxassay_011207_19
TS23: mandible Weak Regionally restricted euxassay_011207_19
TS23: renal cortex Moderate Regionally restricted euxassay_011207_19
TS23: lung Weak Regionally restricted euxassay_011207_19
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_011207_19
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_19
Specimen euxassay_011207_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_20
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_20
TS23: vibrissa Moderate Regionally restricted euxassay_011207_20
TS23: upper jaw molar Weak Regionally restricted euxassay_011207_20
TS23: maxilla Weak Regionally restricted euxassay_011207_20
TS23: lower jaw molar Weak Regionally restricted euxassay_011207_20
TS23: mandible Weak Regionally restricted euxassay_011207_20
TS23: renal cortex Moderate Regionally restricted euxassay_011207_20
TS23: lung Weak Regionally restricted euxassay_011207_20
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_20
Specimen euxassay_011207_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_21
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_21
TS23: vibrissa Moderate Regionally restricted euxassay_011207_21
TS23: mandible Weak Regionally restricted euxassay_011207_21
TS23: maxilla Weak Regionally restricted euxassay_011207_21
TS23: renal cortex Moderate Regionally restricted euxassay_011207_21
TS23: lung Weak Regionally restricted euxassay_011207_21
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_21
Specimen euxassay_011207_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_22
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_22
TS23: vibrissa Weak Regionally restricted euxassay_011207_22
TS23: mandible Weak Regionally restricted euxassay_011207_22
TS23: maxilla Weak Regionally restricted euxassay_011207_22
TS23: lung Weak Regionally restricted euxassay_011207_22
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_22
Specimen euxassay_011207_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_23
TS23: telencephalon ventricular layer Weak Uniform euxassay_011207_23
TS23: mandible Weak Regionally restricted euxassay_011207_23
TS23: lung Weak Regionally restricted euxassay_011207_23
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_23
Specimen euxassay_011207_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011207_24
TS23: mandible Weak Regionally restricted euxassay_011207_24
TS23: lung Weak Regionally restricted euxassay_011207_24
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011207_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory