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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826974
Gene symbol: Onecut3
Gene name: one cut domain, family member 3
Probe: T55136
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019619_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_019619_01
TS23: telencephalon Strong Regionally restricted euxassay_019619_01
Specimen euxassay_019619_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_019619_02
TS23: telencephalon Strong Regionally restricted euxassay_019619_02
Specimen euxassay_019619_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_019619_03
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019619_03
TS23: telencephalon Strong Regionally restricted euxassay_019619_03
TS23: hindbrain Strong Regionally restricted euxassay_019619_03
Specimen euxassay_019619_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019619_04
TS23: facial ganglion Strong Regionally restricted euxassay_019619_04
TS23: telencephalon Strong Regionally restricted euxassay_019619_04
TS23: hindbrain Strong Regionally restricted euxassay_019619_04
Specimen euxassay_019619_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019619_05
TS23: facial ganglion Strong Regionally restricted euxassay_019619_05
TS23: telencephalon Strong Regionally restricted euxassay_019619_05
TS23: hindbrain Strong Regionally restricted euxassay_019619_05
TS23: midbrain Strong Regionally restricted euxassay_019619_05
Specimen euxassay_019619_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019619_06
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_019619_06
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_019619_06
TS23: midbrain Strong Regionally restricted euxassay_019619_06
TS23: hindbrain Strong Regionally restricted euxassay_019619_06
TS23: telencephalon Strong Regionally restricted euxassay_019619_06
TS23: diencephalon Strong Regionally restricted euxassay_019619_06
Specimen euxassay_019619_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019619_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_019619_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_019619_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019619_07
TS23: midbrain Strong Regionally restricted euxassay_019619_07
TS23: hindbrain Strong Regionally restricted euxassay_019619_07
TS23: telencephalon Strong Regionally restricted euxassay_019619_07
TS23: diencephalon Strong Regionally restricted euxassay_019619_07
Specimen euxassay_019619_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_019619_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019619_08
TS23: vagus ganglion Strong Regionally restricted euxassay_019619_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019619_08
TS23: midbrain Strong Regionally restricted euxassay_019619_08
TS23: hindbrain Strong Regionally restricted euxassay_019619_08
TS23: telencephalon Strong Regionally restricted euxassay_019619_08
TS23: diencephalon Strong Regionally restricted euxassay_019619_08
Specimen euxassay_019619_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019619_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019619_09
TS23: spinal cord Strong Regionally restricted euxassay_019619_09
TS23: midbrain Strong Regionally restricted euxassay_019619_09
TS23: hindbrain Strong Regionally restricted euxassay_019619_09
TS23: telencephalon Strong Regionally restricted euxassay_019619_09
TS23: diencephalon Strong Regionally restricted euxassay_019619_09
Specimen euxassay_019619_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019619_10
TS23: spinal cord Strong Regionally restricted euxassay_019619_10
TS23: midbrain Strong Regionally restricted euxassay_019619_10
TS23: hindbrain Strong Regionally restricted euxassay_019619_10
TS23: telencephalon Strong Regionally restricted euxassay_019619_10
TS23: diencephalon Strong Regionally restricted euxassay_019619_10
Specimen euxassay_019619_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019619_11
TS23: spinal cord Strong Regionally restricted euxassay_019619_11
TS23: midbrain Strong Regionally restricted euxassay_019619_11
TS23: hindbrain Strong Regionally restricted euxassay_019619_11
TS23: diencephalon Strong Regionally restricted euxassay_019619_11
TS23: telencephalon Strong Regionally restricted euxassay_019619_11
Specimen euxassay_019619_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019619_12
TS23: spinal cord Strong Regionally restricted euxassay_019619_12
TS23: midbrain Strong Regionally restricted euxassay_019619_12
TS23: hindbrain Strong Regionally restricted euxassay_019619_12
TS23: telencephalon Strong Regionally restricted euxassay_019619_12
TS23: diencephalon Strong Regionally restricted euxassay_019619_12
Specimen euxassay_019619_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Regionally restricted euxassay_019619_13
TS23: midbrain Strong Regionally restricted euxassay_019619_13
TS23: hindbrain Strong Regionally restricted euxassay_019619_13
TS23: telencephalon Strong Regionally restricted euxassay_019619_13
TS23: diencephalon Strong Regionally restricted euxassay_019619_13
Specimen euxassay_019619_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Regionally restricted euxassay_019619_14
TS23: midbrain Strong Regionally restricted euxassay_019619_14
TS23: hindbrain Strong Regionally restricted euxassay_019619_14
TS23: telencephalon Strong Regionally restricted euxassay_019619_14
TS23: diencephalon Strong Regionally restricted euxassay_019619_14
Specimen euxassay_019619_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindbrain Strong Regionally restricted euxassay_019619_15
TS23: midbrain Strong Regionally restricted euxassay_019619_15
TS23: telencephalon Strong Regionally restricted euxassay_019619_15
TS23: diencephalon Strong Regionally restricted euxassay_019619_15
TS23: spinal cord Strong Regionally restricted euxassay_019619_15
Specimen euxassay_019619_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_019619_16
TS23: midbrain Moderate Regionally restricted euxassay_019619_16
TS23: hindbrain Moderate Regionally restricted euxassay_019619_16
TS23: telencephalon Moderate Regionally restricted euxassay_019619_16
TS23: diencephalon Moderate Regionally restricted euxassay_019619_16
Specimen euxassay_019619_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Strong Regionally restricted euxassay_019619_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019619_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019619_17
TS23: midbrain Strong Regionally restricted euxassay_019619_17
TS23: hindbrain Strong Regionally restricted euxassay_019619_17
TS23: telencephalon Strong Regionally restricted euxassay_019619_17
TS23: diencephalon Strong Regionally restricted euxassay_019619_17
Specimen euxassay_019619_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019619_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_019619_18
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_019619_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019619_18
TS23: midbrain Strong Regionally restricted euxassay_019619_18
TS23: hindbrain Strong Regionally restricted euxassay_019619_18
TS23: telencephalon Strong Regionally restricted euxassay_019619_18
TS23: diencephalon Strong Regionally restricted euxassay_019619_18
Specimen euxassay_019619_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019619_19
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_019619_19
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_019619_19
TS23: telencephalon Strong Regionally restricted euxassay_019619_19
TS23: hindbrain Strong Regionally restricted euxassay_019619_19
Specimen euxassay_019619_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019619_20
TS23: facial ganglion Strong Regionally restricted euxassay_019619_20
TS23: telencephalon Strong Regionally restricted euxassay_019619_20
TS23: hindbrain Strong Regionally restricted euxassay_019619_20
Specimen euxassay_019619_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019619_21
TS23: facial ganglion Strong Regionally restricted euxassay_019619_21
TS23: telencephalon Strong Regionally restricted euxassay_019619_21
TS23: hindbrain Strong Regionally restricted euxassay_019619_21
Specimen euxassay_019619_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019619_22
TS23: facial ganglion Strong Regionally restricted euxassay_019619_22
TS23: telencephalon Strong Regionally restricted euxassay_019619_22
Specimen euxassay_019619_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_019619_23
TS23: telencephalon Strong Regionally restricted euxassay_019619_23
Specimen euxassay_019619_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_019619_24
TS23: telencephalon Strong Regionally restricted euxassay_019619_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory