Foxj1 RNA in situ Gene Expression Assay

Gene Expression Data
Assay Details

Assay

Reference:	J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type:	RNA in situ
MGI Accession ID:	MGI:4824908
Gene symbol:	Foxj1
Gene name:	forkhead box J1

Probe:	T55056
Probe preparation:	Antisense labelled with digoxigenin RNA
Visualized with:	Alkaline phosphatase
Assay notes:	Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.

Results

euxassay_019653_02 ©

Specimen euxassay_019653_02: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: metencephalon part of 4th ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_02

euxassay_019653_03 ©

Specimen euxassay_019653_03: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: metencephalon part of 4th ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_03

euxassay_019653_04 ©

Specimen euxassay_019653_04: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: metencephalon part of 4th ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_04

euxassay_019653_05 ©

Specimen euxassay_019653_05: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: metencephalon part of 4th ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_05
TS23: lateral ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_05

euxassay_019653_06 ©

Specimen euxassay_019653_06: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: metencephalon part of 4th ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_06
TS23: lateral ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_06

euxassay_019653_07 ©

Specimen euxassay_019653_07: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: metencephalon part of 4th ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_07
TS23: lateral ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_07

euxassay_019653_08 ©

Specimen euxassay_019653_08: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: metencephalon part of 4th ventricle choroid plexus	Moderate	Regionally restricted	euxassay_019653_08
TS23: lateral ventricle choroid plexus	Moderate	Regionally restricted	euxassay_019653_08

euxassay_019653_09 ©

Specimen euxassay_019653_09: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: metencephalon part of 4th ventricle choroid plexus	Moderate	Regionally restricted	euxassay_019653_09
TS23: lateral ventricle choroid plexus	Moderate	Regionally restricted	euxassay_019653_09

euxassay_019653_10 ©

Specimen euxassay_019653_10: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: metencephalon part of 4th ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_10
TS23: lateral ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_10
TS23: olfactory epithelium	Strong	Regionally restricted	euxassay_019653_10

euxassay_019653_11 ©

Specimen euxassay_019653_11: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: metencephalon part of 4th ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_11
TS23: lateral ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_11
TS23: olfactory epithelium	Strong	Regionally restricted	euxassay_019653_11
TS23: midbrain floor plate	Moderate	Regionally restricted	euxassay_019653_11

euxassay_019653_12 ©

Specimen euxassay_019653_12: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: lateral ventricle choroid plexus	Moderate	Regionally restricted	euxassay_019653_12
TS23: olfactory epithelium	Strong	Regionally restricted	euxassay_019653_12
TS23: midbrain floor plate	Weak	Regionally restricted	euxassay_019653_12
TS23: diencephalon floor plate	Weak	Regionally restricted	euxassay_019653_12

euxassay_019653_13 ©

Specimen euxassay_019653_13: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: metencephalon part of 4th ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_13
TS23: lateral ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_13
TS23: olfactory epithelium	Strong	Regionally restricted	euxassay_019653_13
TS23: spinal cord floor plate	Moderate	Regionally restricted	euxassay_019653_13

euxassay_019653_14 ©

Specimen euxassay_019653_14: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: metencephalon part of 4th ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_14
TS23: lateral ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_14
TS23: olfactory epithelium	Strong	Regionally restricted	euxassay_019653_14
TS23: spinal cord floor plate	Moderate	Regionally restricted	euxassay_019653_14

euxassay_019653_15 ©

Specimen euxassay_019653_15: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: metencephalon part of 4th ventricle choroid plexus	Moderate	Regionally restricted	euxassay_019653_15
TS23: lateral ventricle choroid plexus	Moderate	Regionally restricted	euxassay_019653_15
TS23: olfactory epithelium	Strong	Regionally restricted	euxassay_019653_15
TS23: spinal cord floor plate	Weak	Regionally restricted	euxassay_019653_15

Specimen euxassay_019653_16: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: metencephalon part of 4th ventricle choroid plexus	Moderate	Regionally restricted	euxassay_019653_16
TS23: lateral ventricle choroid plexus	Moderate	Regionally restricted	euxassay_019653_16

Specimen euxassay_019653_17: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: metencephalon part of 4th ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_17
TS23: lateral ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_17
TS23: olfactory epithelium	Strong	Regionally restricted	euxassay_019653_17

Specimen euxassay_019653_18: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: metencephalon part of 4th ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_18
TS23: lateral ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_18
TS23: olfactory epithelium	Strong	Regionally restricted	euxassay_019653_18

Specimen euxassay_019653_19: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: metencephalon part of 4th ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_19
TS23: lateral ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_19
TS23: olfactory epithelium	Strong	Regionally restricted	euxassay_019653_19

Specimen euxassay_019653_20: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image
TS23: metencephalon part of 4th ventricle choroid plexus	Moderate	Regionally restricted	euxassay_019653_20
TS23: lateral ventricle choroid plexus	Moderate	Regionally restricted	euxassay_019653_20
TS23: olfactory epithelium	Strong	Regionally restricted	euxassay_019653_20

Specimen euxassay_019653_21: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS23: metencephalon part of 4th ventricle choroid plexus	Strong	Regionally restricted	euxassay_019653_21
TS23: olfactory epithelium	Strong	Regionally restricted	euxassay_019653_21

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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