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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824897
Gene symbol: Foxb1
Gene name: forkhead box B1
Probe: T55048
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019645_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Regionally restricted euxassay_019645_07
Specimen euxassay_019645_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons ventricular layer Strong Regionally restricted euxassay_019645_08
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019645_08
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019645_08
Specimen euxassay_019645_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons ventricular layer Strong Regionally restricted euxassay_019645_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019645_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019645_09
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019645_09
Specimen euxassay_019645_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019645_10
TS23: medulla oblongata basal plate Strong Regionally restricted euxassay_019645_10
TS23: pons ventricular layer Strong Regionally restricted euxassay_019645_10
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019645_10
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_019645_10
Specimen euxassay_019645_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019645_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019645_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019645_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_019645_11
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019645_11
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019645_11
Specimen euxassay_019645_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019645_12
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019645_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_019645_12
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_019645_12
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019645_12
TS23: ventral grey horn Strong Regionally restricted euxassay_019645_12
Specimen euxassay_019645_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019645_13
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019645_13
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019645_13
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_019645_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_019645_13
TS23: ventral grey horn Strong Regionally restricted euxassay_019645_13
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_019645_13
Specimen euxassay_019645_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019645_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019645_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019645_14
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_019645_14
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019645_14
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_019645_14
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_019645_14
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_019645_14
TS23: ventral grey horn Strong Regionally restricted euxassay_019645_14
Specimen euxassay_019645_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019645_15
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019645_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019645_15
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_019645_15
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019645_15
TS23: ventral grey horn Strong Regionally restricted euxassay_019645_15
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_019645_15
Specimen euxassay_019645_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons ventricular layer Strong Regionally restricted euxassay_019645_16
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019645_16
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019645_16
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019645_16
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019645_16
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019645_16
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_019645_16
TS23: ventral grey horn Strong Regionally restricted euxassay_019645_16
Specimen euxassay_019645_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019645_17
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019645_17
TS23: pons ventricular layer Strong Regionally restricted euxassay_019645_17
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019645_17
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019645_17
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019645_17
TS23: ventral grey horn Strong Regionally restricted euxassay_019645_17
Specimen euxassay_019645_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons ventricular layer Strong Regionally restricted euxassay_019645_18
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019645_18
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019645_18
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019645_18
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019645_18
Specimen euxassay_019645_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019645_19
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019645_19
TS23: pons mantle layer Strong Regionally restricted euxassay_019645_19
TS23: pons ventricular layer Strong Regionally restricted euxassay_019645_19
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/18/2025
MGI 6.24 		The Jackson Laboratory