About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823792
Gene symbol: Cds1
Gene name: CDP-diacylglycerol synthase 1
Probe: IMAGE clone 3155865
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_002822_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_002822_01
Specimen euxassay_002822_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_002822_02
Specimen euxassay_002822_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_002822_03
Specimen euxassay_002822_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_002822_04
TS23: vibrissa Weak Regionally restricted euxassay_002822_04
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_002822_04
TS23: epidermis Strong Regionally restricted euxassay_002822_04
Specimen euxassay_002822_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_002822_05
TS23: vibrissa Moderate Regionally restricted euxassay_002822_05
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_002822_05
TS23: axial musculature Weak Regionally restricted euxassay_002822_05
TS23: epidermis Strong Regionally restricted euxassay_002822_05
Specimen euxassay_002822_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_002822_06
TS23: vibrissa Moderate Regionally restricted euxassay_002822_06
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_002822_06
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002822_06
TS23: axial musculature Weak Regionally restricted euxassay_002822_06
TS23: epidermis Strong Regionally restricted euxassay_002822_06
Specimen euxassay_002822_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_002822_07
TS23: vibrissa Moderate Regionally restricted euxassay_002822_07
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_002822_07
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002822_07
TS23: axial musculature Weak Regionally restricted euxassay_002822_07
TS23: epidermis Strong Regionally restricted euxassay_002822_07
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_002822_07
TS23: submandibular gland primordium Weak Regionally restricted euxassay_002822_07
Specimen euxassay_002822_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_002822_08
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_002822_08
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_002822_08
TS23: axial musculature Weak Regionally restricted euxassay_002822_08
TS23: epidermis Strong Regionally restricted euxassay_002822_08
TS23: olfactory epithelium Moderate Regionally restricted euxassay_002822_08
TS23: renal calyx Moderate Regionally restricted euxassay_002822_08
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_002822_08 trigeminal motor nucleus
TS23: thalamus mantle layer Strong Regionally restricted euxassay_002822_08
TS23: submandibular gland primordium Weak Regionally restricted euxassay_002822_08
Specimen euxassay_002822_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_002822_09
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_002822_09
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_002822_09
TS23: axial musculature Weak Regionally restricted euxassay_002822_09
TS23: epidermis Strong Regionally restricted euxassay_002822_09
TS23: olfactory epithelium Strong Regionally restricted euxassay_002822_09
TS23: renal calyx Strong Regionally restricted euxassay_002822_09
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_002822_09 facial motor nucleus
TS23: thalamus mantle layer Strong Regionally restricted euxassay_002822_09
TS23: submandibular gland primordium Weak Regionally restricted euxassay_002822_09
TS23: dorsal root ganglion Weak Regionally restricted euxassay_002822_09
Specimen euxassay_002822_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_002822_10
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_002822_10
TS23: epidermis Strong Regionally restricted euxassay_002822_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_002822_10
TS23: renal pelvis Strong Regionally restricted euxassay_002822_10
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_002822_10 facial motor nucleus
TS23: thalamus mantle layer Strong Regionally restricted euxassay_002822_10
TS23: submandibular gland primordium Weak Regionally restricted euxassay_002822_10
TS23: dorsal root ganglion Weak Regionally restricted euxassay_002822_10
Specimen euxassay_002822_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_002822_11
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_002822_11
TS23: epidermis Strong Regionally restricted euxassay_002822_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_002822_11
TS23: renal calyx Strong Regionally restricted euxassay_002822_11
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_002822_11
TS23: dorsal root ganglion Weak Regionally restricted euxassay_002822_11
Specimen euxassay_002822_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_002822_12
TS23: epidermis Strong Regionally restricted euxassay_002822_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_002822_12
TS23: renal calyx Strong Regionally restricted euxassay_002822_12
TS23: thymus primordium Strong Uniform euxassay_002822_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_002822_12
TS23: dorsal root ganglion Weak Regionally restricted euxassay_002822_12
Specimen euxassay_002822_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_002822_13
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_002822_13
TS23: epidermis Strong Regionally restricted euxassay_002822_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_002822_13
TS23: thymus primordium Strong Uniform euxassay_002822_13
TS23: ventral grey horn Moderate Regionally restricted euxassay_002822_13
TS23: dorsal root ganglion Weak Regionally restricted euxassay_002822_13
Specimen euxassay_002822_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_002822_14
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_002822_14
TS23: epidermis Strong Regionally restricted euxassay_002822_14
TS23: thymus primordium Strong Uniform euxassay_002822_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_002822_14
TS23: bladder Strong Regionally restricted euxassay_002822_14
TS23: urethra Weak Regionally restricted euxassay_002822_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
Specimen euxassay_002822_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_002822_15
TS23: epidermis Strong Regionally restricted euxassay_002822_15
TS23: olfactory epithelium Strong Regionally restricted euxassay_002822_15
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_002822_15
TS23: thymus primordium Strong Uniform euxassay_002822_15
TS23: ventral grey horn Weak Regionally restricted euxassay_002822_15
TS23: bladder Strong Regionally restricted euxassay_002822_15
TS23: urethra Weak Regionally restricted euxassay_002822_15 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: rectum Weak Regionally restricted euxassay_002822_15
Specimen euxassay_002822_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_002822_16
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_002822_16
TS23: epidermis Strong Regionally restricted euxassay_002822_16
TS23: olfactory epithelium Strong Regionally restricted euxassay_002822_16
TS23: thalamus mantle layer Strong Regionally restricted euxassay_002822_16
TS23: thymus primordium Strong Uniform euxassay_002822_16
TS23: ventral grey horn Weak Regionally restricted euxassay_002822_16
TS23: bladder Strong Regionally restricted euxassay_002822_16
Specimen euxassay_002822_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_002822_17
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002822_17
TS23: epidermis Strong Regionally restricted euxassay_002822_17
TS23: olfactory epithelium Strong Regionally restricted euxassay_002822_17
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_002822_17 facial motor nucleus
TS23: thalamus mantle layer Strong Regionally restricted euxassay_002822_17
TS23: thymus primordium Strong Uniform euxassay_002822_17
TS23: ventral grey horn Moderate Regionally restricted euxassay_002822_17
TS23: dorsal root ganglion Weak Regionally restricted euxassay_002822_17
Specimen euxassay_002822_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_002822_18
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_002822_18
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002822_18
TS23: epidermis Strong Regionally restricted euxassay_002822_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_002822_18
TS23: renal calyx Strong Regionally restricted euxassay_002822_18
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_002822_18 facial motor nucleus
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_002822_18 trigeminal motor nucleus
TS23: thalamus mantle layer Strong Regionally restricted euxassay_002822_18
TS23: ventral grey horn Moderate Regionally restricted euxassay_002822_18
TS23: submandibular gland primordium Weak Regionally restricted euxassay_002822_18
TS23: dorsal root ganglion Weak Regionally restricted euxassay_002822_18
Specimen euxassay_002822_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_002822_19
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_002822_19
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002822_19
TS23: epidermis Strong Regionally restricted euxassay_002822_19
TS23: olfactory epithelium Strong Regionally restricted euxassay_002822_19
TS23: renal calyx Strong Regionally restricted euxassay_002822_19
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_002822_19
TS23: submandibular gland primordium Weak Regionally restricted euxassay_002822_19
TS23: dorsal root ganglion Weak Regionally restricted euxassay_002822_19
Specimen euxassay_002822_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_002822_20
TS23: vibrissa Moderate Regionally restricted euxassay_002822_20
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_002822_20
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002822_20
TS23: epidermis Strong Regionally restricted euxassay_002822_20
TS23: renal calyx Strong Regionally restricted euxassay_002822_20
TS23: submandibular gland primordium Weak Regionally restricted euxassay_002822_20
Specimen euxassay_002822_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_002822_21
TS23: vibrissa Moderate Regionally restricted euxassay_002822_21
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_002822_21
TS23: axial musculature Weak Regionally restricted euxassay_002822_21
TS23: epidermis Strong Regionally restricted euxassay_002822_21
TS23: renal calyx Strong Regionally restricted euxassay_002822_21
TS23: submandibular gland primordium Weak Regionally restricted euxassay_002822_21
Specimen euxassay_002822_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_002822_22
TS23: vibrissa Moderate Regionally restricted euxassay_002822_22
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_002822_22
TS23: axial musculature Weak Regionally restricted euxassay_002822_22
TS23: epidermis Strong Regionally restricted euxassay_002822_22
TS23: renal calyx Strong Regionally restricted euxassay_002822_22
Specimen euxassay_002822_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_002822_23
TS23: vibrissa Weak Regionally restricted euxassay_002822_23
TS23: axial musculature Weak Regionally restricted euxassay_002822_23
TS23: epidermis Strong Regionally restricted euxassay_002822_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory