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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823513
Gene symbol: Abtb3
Gene name: ankyrin repeat and BTB domain containing 3
Probe: T30711
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012089_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_012089_01
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_012089_01
Specimen euxassay_012089_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_02
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_012089_02
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_012089_02
TS23: trigeminal ganglion Strong Single cells euxassay_012089_02
Specimen euxassay_012089_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_03
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_012089_03
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_012089_03
TS23: trigeminal ganglion Strong Single cells euxassay_012089_03
Specimen euxassay_012089_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_04
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_012089_04
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_012089_04
TS23: trigeminal ganglion Moderate Single cells euxassay_012089_04
Specimen euxassay_012089_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_05
TS23: medulla oblongata alar plate marginal layer Strong Regionally restricted euxassay_012089_05
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_012089_05
TS23: pons mantle layer Weak Regionally restricted euxassay_012089_05
TS23: trigeminal ganglion Moderate Single cells euxassay_012089_05
Specimen euxassay_012089_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_06
TS23: medulla oblongata alar plate marginal layer Strong Regionally restricted euxassay_012089_06
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_012089_06
TS23: pons mantle layer Weak Regionally restricted euxassay_012089_06
TS23: trigeminal ganglion Moderate Single cells euxassay_012089_06
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_012089_06
Specimen euxassay_012089_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_07
TS23: medulla oblongata alar plate marginal layer Strong Regionally restricted euxassay_012089_07
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_012089_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_012089_07
TS23: renal cortex Moderate Regionally restricted euxassay_012089_07
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_012089_07
TS23: trigeminal ganglion Moderate Single cells euxassay_012089_07
TS23: dorsal root ganglion Weak Single cells euxassay_012089_07
Specimen euxassay_012089_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_08
TS23: medulla oblongata alar plate marginal layer Strong Regionally restricted euxassay_012089_08
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_012089_08
TS23: pons mantle layer Weak Regionally restricted euxassay_012089_08
TS23: renal cortex Moderate Regionally restricted euxassay_012089_08
TS23: dorsal root ganglion Weak Single cells euxassay_012089_08
Specimen euxassay_012089_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_09
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_012089_09
TS23: pons mantle layer Weak Regionally restricted euxassay_012089_09
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012089_09
TS23: renal cortex Moderate Regionally restricted euxassay_012089_09
Specimen euxassay_012089_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_10
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_012089_10
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012089_10
TS23: renal cortex Moderate Regionally restricted euxassay_012089_10
Specimen euxassay_012089_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_11
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_012089_11
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012089_11
TS23: thymus primordium Moderate Regionally restricted euxassay_012089_11
Specimen euxassay_012089_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_012089_12
TS23: pons mantle layer Weak Regionally restricted euxassay_012089_12
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012089_12
TS23: thymus primordium Moderate Regionally restricted euxassay_012089_12
Specimen euxassay_012089_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_13
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012089_13
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_012089_13
TS23: thymus primordium Weak Regionally restricted euxassay_012089_13
Specimen euxassay_012089_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_14
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_012089_14
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_012089_14
TS23: thymus primordium Weak Regionally restricted euxassay_012089_14
TS23: dorsal root ganglion Weak Single cells euxassay_012089_14
Specimen euxassay_012089_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_15
TS23: medulla oblongata alar plate marginal layer Moderate Regionally restricted euxassay_012089_15
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_012089_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_012089_15
TS23: thymus primordium Weak Regionally restricted euxassay_012089_15
TS23: dorsal root ganglion Weak Single cells euxassay_012089_15
Specimen euxassay_012089_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_16
TS23: medulla oblongata alar plate marginal layer Strong Regionally restricted euxassay_012089_16
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_012089_16
TS23: pons mantle layer Weak Regionally restricted euxassay_012089_16
TS23: renal cortex Moderate Regionally restricted euxassay_012089_16
TS23: trigeminal ganglion Moderate Single cells euxassay_012089_16
TS23: dorsal root ganglion Weak Single cells euxassay_012089_16
Specimen euxassay_012089_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_17
TS23: medulla oblongata alar plate marginal layer Strong Regionally restricted euxassay_012089_17
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_012089_17
TS23: pons mantle layer Weak Regionally restricted euxassay_012089_17
TS23: renal cortex Moderate Regionally restricted euxassay_012089_17
TS23: trigeminal ganglion Moderate Single cells euxassay_012089_17
Specimen euxassay_012089_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_18
TS23: medulla oblongata alar plate marginal layer Strong Regionally restricted euxassay_012089_18
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_012089_18
TS23: pons mantle layer Weak Regionally restricted euxassay_012089_18
TS23: renal cortex Moderate Regionally restricted euxassay_012089_18
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_012089_18
TS23: trigeminal ganglion Moderate Single cells euxassay_012089_18
Specimen euxassay_012089_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_19
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_012089_19
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_012089_19
TS23: renal cortex Moderate Regionally restricted euxassay_012089_19
TS23: trigeminal ganglion Moderate Single cells euxassay_012089_19
Specimen euxassay_012089_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_20
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_012089_20
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012089_20
TS23: trigeminal ganglion Moderate Single cells euxassay_012089_20
Specimen euxassay_012089_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_012089_21
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_012089_21
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_012089_21
TS23: trigeminal ganglion Moderate Single cells euxassay_012089_21
Specimen euxassay_012089_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_012089_22
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_012089_22
Specimen euxassay_012089_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_012089_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory