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Gene Expression Data
Assay Details
Assay
Reference: J:157819 Shimogori T, et al., A genomic atlas of mouse hypothalamic development. Nat Neurosci. 2010;13(6):767-75
Assay type: RNA in situ
MGI Accession ID: MGI:4452112
Gene symbol: Nr5a1
Gene name: nuclear receptor subfamily 5, group A, member 1
Probe: IMAGE clone 6852029
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 4g: embryonic day 12.5 (more )
Note: Double labeled: blue - Nr5a1; brown - Lhx6 (assay MGI:4452075).
Structure Level Pattern Image Note
TS20: hypothalamus Present Regionally restricted 4g Expression is present in the ventromedial hypothalamic nucleus. It is not present in the intrahypothalamic diagonal or tuberomammillary terminal.
Specimen 4h: embryonic day 16.5 (more )
Note: Double labeled: blue - Nr5a1; brown - Lhx6 (assay MGI:4452075).
Structure Level Pattern Image Note
TS24: hypothalamus Present Regionally restricted 4h Expression is present in the ventromedial hypothalamic nucleus.
Specimen S4u: embryonic day 11.5 (more )
Note: Double labeled: blue - Nr5a1; brown - Shh (assay MGI:4452154).
Structure Level Pattern Image Note
TS19: diencephalon Present Regionally restricted S4_u Expression is present in the ventromedial hypothalamic nucleus.
Specimen S4v: embryonic day 12.5 (more )
Note: Double labeled: blue - Nr5a1; brown - Shh (assay MGI:4452154).
Structure Level Pattern Image Note
TS20: hypothalamus Present Regionally restricted S4_v Expression is present in the ventromedial hypothalamic nucleus.
Specimen S4w: embryonic day 14.5 (more )
Note: Double labeled: blue - Nr5a1; brown - Shh (assay MGI:4452154).
Structure Level Pattern Image Note
TS22: hypothalamus Present Regionally restricted S4_w Expression is present in the ventromedial hypothalamic nucleus.
Specimen S4x: embryonic day 16.5 (more )
Note: Double labeled: blue - Nr5a1; brown - Shh (assay MGI:4452154).
Structure Level Pattern Image Note
TS24: hypothalamus Present Regionally restricted S4_x Expression is present in the ventromedial hypothalamic nucleus.
Specimen S6e: embryonic day 12.5 (more )
Note: Double labeled: blue - Nr5a1; brown - Shh (assay MGI:4452154).
Structure Level Pattern Image Note
TS20: hypothalamus Present Regionally restricted S6_e Expression is present in the ventromedial hypothalamic nucleus.
Specimen S6f: embryonic day 12.5; Shhtm2Amc/Shhtm2Amc, Tg(Nkx2-1-cre)2Sand/0 (more )
Note: Conditional mutant. Double labeled: blue - Nr5a1; brown - Shh (assay MGI:4452154).
Structure Level Pattern Image Note
TS20: hypothalamus Absent S6_f Ventromedial hypothalamic nucleus-specific expression is absent from the mutant.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/14/2024
MGI 6.23 		The Jackson Laboratory