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Gene Expression Data
Assay Details
Assay
Reference: J:157819 Shimogori T, et al., A genomic atlas of mouse hypothalamic development. Nat Neurosci. 2010;13(6):767-75
Assay type: RNA in situ
MGI Accession ID: MGI:4452075
Gene symbol: Lhx6
Gene name: LIM homeobox protein 6
Probe: MGC clone 85996
Probe preparation: Antisense labelled with fluorescein RNA
Visualized with: Alkaline phosphatase
Results
Specimen 3j: embryonic day 12.5 (more )
Note: Double labeled: brown - Lhx6; blue - Nkx2-1 (assay MGI:4450737).
Structure Level Pattern Image Note
TS20: hypothalamus Present Regionally restricted 3j Expression is present in the intrahypothalamic diagonal.
TS20: diencephalon Present Regionally restricted 3j Expression is present in the tubermammillary terminal.
Specimen 4a: embryonic day 12.5 (more )
Note: Double labeled: brown - Lhx6; blue - Foxb1 (assay MGI:4450814).
Structure Level Pattern Image Note
TS20: diencephalon Present Regionally restricted 4a Expression is present in the tuberomammillary terminal.
Specimen 4b: embryonic day 16.5 (more )
Note: Double labeled: brown - Lhx6; blue - Foxb1 (assay MGI:4450814).
Structure Level Pattern Image Note
TS24: diencephalon Present Regionally restricted 4b Expression is present in the tuberomammilary terminal.
Specimen 4c: embryonic day 12.5 (more )
Note: Double labeled: brown - Lhx6; blue - Irx5 (assay MGI:4450789).
Structure Level Pattern Image Note
TS20: diencephalon Present Regionally restricted 4c Expression is present in the tuberomammilary terminal.
Specimen 4d: embryonic day 16.5 (more )
Note: Double labeled: brown - Lhx6; blue - Irx5 (assay MGI:4450789).
Structure Level Pattern Image Note
TS24: diencephalon Present Regionally restricted 4d Expression is present in the tuberomammilary terminal.
Specimen 4e: embryonic day 12.5 (more )
Note: Double labeled: brown - Lhx6; blue - Lef1 (assay MGI:4450873).
Structure Level Pattern Image Note
TS20: diencephalon Present Regionally restricted 4e Expression is present in the tuberomammilary terminal.
Specimen 4f: embryonic day 16.5 (more )
Note: Double labeled: brown - Lhx6; blue - Lef1 (assay MGI:4450873).
Structure Level Pattern Image Note
TS24: diencephalon Present Regionally restricted 4f Expression is present in the tuberomammilary terminal.
Specimen 4g: embryonic day 12.5 (more )
Note: Double labeled: brown - Lhx6; blue - Nr5a1 (assay MGI:4452112).
Structure Level Pattern Image Note
TS20: diencephalon Present Regionally restricted 4g Expression is present in the tuberomammilary terminal.
Specimen 4h: embryonic day 16.5 (more )
Note: Double labeled: brown - Lhx6; blue - Nr5a1 (assay MGI:4452112).
Structure Level Pattern Image Note
TS24: diencephalon Present Regionally restricted 4h Expression is present in the tuberomammilary terminal.
Specimen 5c: postnatal day 6 (more )
Note: Double labeled: brown - Lhx6; blue - Lhx9 (assay MGI:4450767).
Structure Level Pattern Image Note
TS28: hypothalamus Present Regionally restricted 5c Expression is present in the lateral and dorsomedial hypothalamus, including in the intrahypothalamic diagonal.
Specimen 5d: embryonic day 12.5 (more )
Note: Double labeled: brown - Lhx6; blue - Lhx8 (assay MGI:4450748).
Structure Level Pattern Image Note
TS20: hypothalamus Present Regionally restricted 5d Expression is present in the posterior portion of the intrahypothalamic diagonal.
Specimen 5e: embryonic day 16.5 (more )
Note: Double labeled: brown - Lhx6; blue - Lhx8 (assay MGI:4450748).
Structure Level Pattern Image Note
TS24: hypothalamus Present Regionally restricted 5e Expression is present in the intrahypothalamic diagonal.
Specimen 5f: postnatal day 6 (more )
Note: Double labeled: brown - Lhx6; blue - Gal (assay MGI:4452125).
Structure Level Pattern Image Note
TS28: hypothalamus Present Regionally restricted 5f Expression is present in the intrahypothalamic diagonal.
Specimen 5i: postnatal day 6 (more )
Note: Double labeled: brown - Lhx6; blue - Hcrt (assay MGI:4452128).
Structure Level Pattern Image Note
TS28: hypothalamus Present Regionally restricted 5i Expression is present in the intrahypothalamic diagonal.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/07/2024
MGI 6.23 		The Jackson Laboratory