Gene Expression Data
Assay Details
Assay
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Reference:
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J:16725
Fujii T, et al., Expression patterns of the murine LIM class homeobox gene lim1 in the developing brain and excretory system. Dev Dyn. 1994 Jan;199(1):73-83
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:3790070
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Gene symbol:
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Lhx1
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Gene name:
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LIM homeobox protein 1
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Probe:
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clone 31
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
E7.5 not shown:
embryonic day 7.5
(more )
Specimen
E7.5 not shown:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 7.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
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Type:
|
whole mount
|
Specimen
3A:
embryonic day 8.5
(more )
Specimen
3A:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 8.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
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Sex:
|
Not Specified
|
Type:
|
whole mount
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: intermediate mesenchyme |
Present |
Regionally restricted |
3A
|
Expression in a region adjacent to 10 of the 11 somites present.
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Specimen
3B:
embryonic day 8.5
(more )
Specimen
3B:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 8.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: genitourinary system |
Present |
Regionally restricted |
3B
|
Strongest staining between the level of the somites 8-11 in the area of the presumptive mesonephric region.
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TS13: nephrogenic cord |
Present |
|
3B
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Expression in the nephrogenic cord.
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Specimen
3C:
embryonic day 9.5
(more )
Specimen
3C:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 9.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: nephric duct |
Present |
|
3C
|
Expression in the mesonephric duct.
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Specimen
3D:
embryonic day 9.5
(more )
Specimen
3D:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 9.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: nephric duct |
Present |
|
3D
|
Expression in the mesonephric duct.
|
Specimen
3E:
embryonic day 9.5
(more )
Specimen
3E:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 9.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: mesonephros |
Present |
|
3E
|
Globular expression ventral to the mesonephric duct, corresponding to the developing mesonephros.
|
Specimen
E9.5 not shown:
embryonic day 9.5
(more )
Specimen
E9.5 not shown:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 9.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Specimen
3F:
embryonic day 10.5
(more )
Specimen
3F:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 10.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Specimen
3G:
embryonic day 10.5
(more )
Specimen
3G:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 10.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: midbrain |
Present |
Regionally restricted |
3G
|
Expression in distinct dorsal and lateral regions.
|
TS17: hindbrain |
Present |
Regionally restricted |
3G
|
In the dorsolateral region, a single stripe of expression anterior to the otic vesicle, with two stripes posterior to the otic vesicle.
|
Specimen
3H:
embryonic day 10.5
(more )
Specimen
3H:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 10.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: midbrain |
Present |
Regionally restricted |
3H
|
Expression in distinct dorsal and lateral regions.
|
TS17: hindbrain |
Present |
Regionally restricted |
3H
|
Continuous weak expression spanning the dorsolateral regions of expression, connecting the stripes identified in Fig. 3G. In the ventromedial region, fine bands of perpendicular expression are connected by a longitudinal stripe of faint expression.
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Specimen
3I:
embryonic day 10.5
(more )
Specimen
3I:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 10.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
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Sex:
|
Not Specified
|
Type:
|
section from whole mount
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Specimen
3J (left):
embryonic day 10.5
(more )
Specimen
3J (left):
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 10.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: future spinal cord |
Present |
Regionally restricted |
3J (left)
|
Four strips of expressing cells, arranged in 2 tightly apposed pairs dorsally and laterally.
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Specimen
3J (right):
embryonic day 10.5
(more )
Specimen
3J (right):
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 10.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: future spinal cord |
Present |
Regionally restricted |
3J (right)
|
Four strips of expressing cells, arranged in 2 tightly apposed pairs dorsally and laterally.
|
Specimen
E10.5 not shown:
embryonic day 10.5
(more )
Specimen
E10.5 not shown:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 10.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Specimen
3K:
embryonic day 11.5
(more )
Specimen
3K:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 11.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: telencephalon |
Present |
|
3K
|
Expression in the telencephalon becomes more prominent
|
Specimen
3L:
embryonic day 11.5
(more )
Specimen
3L:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 11.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Specimen
5A:
embryonic day 11.5
(more )
Specimen
5A:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 11.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: ureteric bud |
Present |
|
5A
|
|
TS19: metanephros |
Present |
Regionally restricted |
5A
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No expression in the proximal portion of the ureter or in the mesenchymal tissue around the bud.
|
Specimen
5B:
embryonic day 12.5
(more )
Specimen
5B:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 12.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: ureter |
Present |
Regionally restricted |
5B
|
Localized expression in areas coinciding with the position of the buds of the branching ureter.
|
Specimen
5C:
embryonic day 13.5
(more )
Specimen
5C:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 13.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Specimen
5D:
embryonic day 15.5
(more )
Specimen
5D:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 15.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Specimen
E15.5 female not shown:
embryonic day 15.5
(more )
Specimen
E15.5 female not shown:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 15.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Female
|
Type:
|
whole mount
|
Specimen
E15.5 male not shown:
embryonic day 15.5
(more )
Specimen
E15.5 male not shown:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 15.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Male
|
Type:
|
whole mount
|
Specimen
5E:
embryonic day 16.5
(more )
Specimen
5E:
(close )
Genetic Background:
|
FVB/N
|
Age:
|
embryonic day 16.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Structure |
Level |
Pattern |
Image |
Note |
TS24: ureter |
Present |
Regionally restricted |
5E
|
Expression in distal regions of the branching ureter.
|
|