Gene Expression Data
Assay Details
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Assay
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Reference:
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J:79830
Garel S, et al., The early topography of thalamocortical projections is shifted in Ebf1 and Dlx1/2 mutant mice. Development. 2002 Dec;129(24):5621-34
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:3629644
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Gene symbol:
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Cdh6
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Gene name:
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cadherin 6
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Probe:
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Cdh6 probe4
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Probe preparation:
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Antisense RNA
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Assay notes:
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Because they have a have a wild type phenotype, heterozygous animals were used for controls.
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Results
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Specimen
4E:
embryonic day 17.5; Ebf1tm1Rug/Ebf1 +
(more  )
Specimen
4E:
(close  )
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Genetic Background:
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involves: 129S2/SvPas * C57BL/6
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Mutant Allele(s):
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Ebf1tm1Rug/Ebf1+
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Age:
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embryonic day 17.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Specimen
4F:
(close )
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Genetic Background:
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involves: 129S2/SvPas * C57BL/6
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Mutant Allele(s):
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Ebf1tm1Rug/Ebf1tm1Rug
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Age:
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embryonic day 17.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS25: cerebral cortex |
Present |
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4F
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Expression in this mutant is the same as in wild-type embryos.
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Specimen
5C:
embryonic day 16.5; Ebf1tm1Rug/Ebf1 +
(more )
Specimen
5C:
(close )
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Genetic Background:
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involves: 129S2/SvPas * C57BL/6
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Mutant Allele(s):
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Ebf1tm1Rug/Ebf1+
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Age:
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embryonic day 16.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS24: thalamus |
Present |
Regionally restricted |
5C
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Expression is in the dorsal thalamus and is low in the mdeial nuclei.
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Specimen
5D:
(close )
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Genetic Background:
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involves: 129S2/SvPas * C57BL/6
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Mutant Allele(s):
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Ebf1tm1Rug/Ebf1tm1Rug
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Age:
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embryonic day 16.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS24: thalamus |
Present |
Regionally restricted |
5D
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Expression in this mutant is the same as in wild-type embryos.
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Specimen
Not shown, WT:
embryonic day 12.5; Ebf1tm1Rug/Ebf1 +
(more )
Specimen
Not shown, WT:
(close )
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Genetic Background:
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involves: 129S2/SvPas * C57BL/6
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Mutant Allele(s):
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Ebf1tm1Rug/Ebf1+
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Specimen
Not shown, -/-:
(close )
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Genetic Background:
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involves: 129S2/SvPas * C57BL/6
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Mutant Allele(s):
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Ebf1tm1Rug/Ebf1tm1Rug
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: cerebral cortex |
Present |
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Expression in this mutant is the same as in wild-type embryos.
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Specimen
Not shown, WT:
embryonic day 14.5; Ebf1tm1Rug/Ebf1 +
(more )
Specimen
Not shown, WT:
(close )
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Genetic Background:
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involves: 129S2/SvPas * C57BL/6
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Mutant Allele(s):
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Ebf1tm1Rug/Ebf1+
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Specimen
Not shown, -/-:
(close )
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Genetic Background:
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involves: 129S2/SvPas * C57BL/6
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Mutant Allele(s):
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Ebf1tm1Rug/Ebf1tm1Rug
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: thalamus |
Present |
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Expression in this mutant is the same as in wild-type embryos.
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Analysis Tools