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Gene Expression Data
Assay Details
Assay
Reference: J:93819 Sedita J, et al., Differential expression of heparan sulfate 6-O-sulfotransferase isoforms in the mouse embryo suggests distinctive roles during organogenesis. Dev Dyn. 2004 Dec;231(4):782-94
Assay type: RNA in situ
MGI Accession ID: MGI:3526013
Gene symbol: Hs6st1
Gene name: heparan sulfate 6-O-sulfotransferase 1
Probe: 6OST1 cDNA1
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 1A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: foregut Present Regionally restricted 1A Expression is detected in the foregut endoderm, brain ectoderm and neural tube ectoderm.
TS15: future brain Present Regionally restricted 1A Expression is detected in the foregut endoderm, brain ectoderm and neural tube ectoderm.
TS15: neural tube Present Regionally restricted 1A Expression is detected in the foregut endoderm, brain ectoderm and neural tube ectoderm.

Specimen 1H: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: Rathke's pouch Present Regionally restricted 1H Expression detected in the ectodermal cells of Rathke's Pouch and the Infundibulum.
TS15: infundibular recess of 3rd ventricle Present Regionally restricted 1H Expression detected in the ectodermal cells of Rathke's Pouch and the Infundibulum.

Specimen 1J: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: Rathke's pouch Present 1J
TS17: infundibular recess of 3rd ventricle Present 1J

Specimen 1L: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube roof plate Strong 1L
TS15: neural tube Strong Regionally restricted 1L High expression detected in the motor neurons of the neural tube.
TS15: neural tube floor plate Absent 1L

Specimen 1O: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: dorsal root ganglion Present Regionally restricted 1O Expression is detected in the neural tube (absent from floorplate) and the sensory neurons of the dorsal root ganglion.
TS19: neural tube Present Regionally restricted 1O Expression is detected in the neural tube (absent from floorplate) and the sensory neurons of the dorsal root ganglion.
TS19: tail neural tube Present Regionally restricted 1O Expression is detected in the neural tube (absent from floorplate) and the sensory neurons of the dorsal root ganglion.
TS19: neural tube floor plate Absent 1O

Specimen 2B: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: trigeminal ganglion Present Non-Uniform 2B Expression is higher in the dorsal 2/3s of the ganglia.

Specimen 2C: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: pons Weak 2C

Specimen 2D: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: glossopharyngeal ganglion Present 2D

Specimen 3D: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: neural retinal epithelium Weak Non-Uniform 3D Expression is highest in the internal layer.
TS22: pigmented retinal epithelium Absent 3D

Specimen 3G: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: optic nerve Absent 3G

Specimen 3K: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: olfactory epithelium Present 3K

Specimen 4C: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube Present 4C
TS15: trunk somite Absent 4C

Specimen 5A Sec: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: buccopharyngeal membrane endoderm Present Uniform 5A inset , 5A section Expression is increased in the region of the prospective liver.
TS13: foregut diverticulum endoderm Present Uniform 5A inset , 5A section Expression is increased in the region of the prospective liver.
TS13: foregut-midgut junction endoderm Present Uniform 5A inset , 5A section Expression is increased in the region of the prospective liver.

Specimen 5C: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: hepatic primordium Strong Regionally restricted 5C Strong expression is detected in the epithelium of the liver bud.
TS15: pancreas primordium Present Regionally restricted 5C Expression is detected in the epithelium of the pancreatic primordia.

Specimen 5E: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: hepatic primordium parenchyma Present 5E

Specimen 5G: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: pancreas Strong Regionally restricted 5G Strong expression detected in the pancreatic epithelium.

Specimen 5I: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: branchial arch endoderm Present Uniform 5I Expression detected throughout the endoderm and mesoderm of the pharyngeal pouches.
TS15: branchial arch mesenchyme Weak Uniform 5I Expression detected throughout the endoderm and mesoderm of the pharyngeal pouches.

Specimen 5K: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: thyroid primordium Present 5K

Specimen 6A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: foregut Present Regionally restricted 6A Expresion is detected in the foregut endoderm.
TS15: lung epithelium Strong Regionally restricted 6A Expression is increased in the endoderm of the primary lung buds.

Specimen 6B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: esophagus epithelium Present 6B
TS17: trachea epithelium Present 6B

Specimen 6E: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: lung epithelium Present 6E

Specimen 6J: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: lower jaw incisor epithelium Present 6J
TS22: lower jaw molar epithelium Present 6J

Specimen 6M Sec: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: vibrissa Present Regionally restricted 6M section Expression detected in the epithelium of the vibrissae.

Specimen 7A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: forelimb bud ectoderm Present Regionally restricted 7A Expression is limited to the apical ectodermal ridge.

Specimen 7D Sec: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: forelimb bud apical ectodermal ridge Present 7D section
TS16: forelimb bud mesenchyme Present 7D section

Specimen 7K, 7L: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: digit mesenchyme Strong Regionally restricted 7L , 7K Expression is detected in the skeletal muscles of the digits.

Specimen 8A: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: gonad primordium Present Regionally restricted 8A Expression detected in the mesonephric tubule epithelium and genital ridge.
TS16: mesonephric tubule Present Regionally restricted 8A Expression detected in the mesonephric tubule epithelium and genital ridge.

Specimen 8C: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: mesonephric tubule Strong Regionally restricted 8C Expression detected in the mesonephric tubule epithelium.
TS17: gonad primordium Present Regionally restricted 8C Expresion detected in the genital ridge.

Specimen 8E: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: metanephros Present Regionally restricted 8E Expression detected in the kidney epithelium.

Specimen not shown: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: heart Absent


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory