Gene Expression Data
Assay Details
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Assay
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Reference:
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J:35536
Wang W, et al., Msx3: a novel murine homologue of the Drosophila msh homeobox gene restricted to the dorsal embryonic central nervous system. Mech Dev. 1996 Aug;58(1-2):203-15
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:3043096
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Gene symbol:
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Msx3
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Gene name:
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msh homeobox 3
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Probe:
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p1106
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Probe preparation:
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Antisense labelled with S35
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Visualized with:
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Autoradiography
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Results
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Specimen
5A:
embryonic day 9.0
(more  )
Specimen
5A:
(close  )
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Genetic Background:
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C57BL/6J
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Age:
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embryonic day 9.0
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS14: neural tube |
Present |
Regionally restricted |
5A/B
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Expression is in the dorsal neural tube.
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| TS14: future hindbrain |
Present |
Regionally restricted |
5A/B
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The rostral limit of expression is in the rostral hindbrain. Expression is dorsal.
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Specimen
5B:
embryonic day 9.0
(more )
Specimen
5B:
(close )
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Genetic Background:
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C57BL/6J
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Age:
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embryonic day 9.0
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS14: neural tube |
Present |
Regionally restricted |
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Expression is in the dorsal neural tube.
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| TS14: future hindbrain |
Present |
Regionally restricted |
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The rostral limit of expression is in the rostral hindbrain. Expression is dorsal.
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Specimen
5C:
embryonic day 9.5
(more )
Specimen
5C:
(close )
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Genetic Background:
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C57BL/6J
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: future hindbrain |
Present |
Regionally restricted |
5C/D
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Expression is in the dorsal 1/4 of the neural tube from the rostral hindbrain to the caudal tip of the embryo. Signal decreased in a rostrocaudal gradient.
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| TS15: neural tube |
Present |
Regionally restricted |
5C/D
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Expression is in the dorsal 1/4 of the neural tube. Signal decreased in a rostrocaudal gradient.
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| TS15: tail neural tube |
Present |
Regionally restricted |
5C/D
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Expression is in the dorsal 1/4 of the neural tube. Signal decreased in a rostrocaudal gradient.
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Specimen
5D:
embryonic day 9.5
(more )
Specimen
5D:
(close )
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Genetic Background:
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C57BL/6J
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
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Paraffin
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS15: future hindbrain |
Present |
Regionally restricted |
|
Expression is in the dorsal 1/4 of the neural tube from the rostral hindbrain to the caudal tip of the embryo. Signal decreased in a rostrocaudal gradient.
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| TS15: neural tube |
Present |
Regionally restricted |
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Expression is in the dorsal 1/4 of the neural tube. Signal decreased in a rostrocaudal gradient.
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| TS15: tail neural tube |
Present |
Regionally restricted |
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Expression is in the dorsal 1/4 of the neural tube. Signal decreased in a rostrocaudal gradient.
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Specimen
5E:
embryonic day 10.0
(more )
Specimen
5E:
(close )
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Genetic Background:
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C57BL/6J
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Age:
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embryonic day 10.0
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS16: future hindbrain |
Present |
Regionally restricted |
5E/F
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Expression is in the dorsal 1/3 of the neural tube from the rostral hindbrain to the caudal tip of the embryo.
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| TS16: neural tube |
Present |
Regionally restricted |
5E/F
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Expression is in the dorsal 1/3 of the neural tube.
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| TS16: tail future spinal cord |
Present |
Regionally restricted |
5E/F
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Expression is in the dorsal 1/3 of the neural tube.
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Specimen
5F:
embryonic day 10.0
(more )
Specimen
5F:
(close )
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Genetic Background:
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C57BL/6J
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Age:
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embryonic day 10.0
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Paraffin
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS16: future hindbrain |
Present |
Regionally restricted |
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Expression is in the dorsal 1/3 of the neural tube from the rostral hindbrain to the caudal tip of the embryo.
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| TS16: neural tube |
Present |
Regionally restricted |
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Expression is in the dorsal 1/3 of the neural tube.
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| TS16: tail future spinal cord |
Present |
Regionally restricted |
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Expression is in the dorsal 1/3 of the neural tube.
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Specimen
5G:
embryonic day 10.5
(more )
Specimen
5G:
(close )
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Genetic Background:
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C57BL/6J
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Age:
|
embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: hindbrain |
Present |
Regionally restricted |
5G/H
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Expression is in the dorsal 1/4 of the neural tube from the rostral hindbrain to the caudal tip of the embryo.
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| TS17: neural tube |
Present |
Regionally restricted |
5G/H
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Expression is in the dorsal 1/4 of the neural tube.
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| TS17: tail neural tube |
Present |
Regionally restricted |
5G/H
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Expression is in the dorsal 1/4 of the neural tube.
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Specimen
5H:
embryonic day 10.5
(more )
Specimen
5H:
(close )
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Genetic Background:
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C57BL/6J
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Age:
|
embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
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Paraffin
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS17: hindbrain |
Present |
Regionally restricted |
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Expression is in the dorsal 1/4 of the neural tube from the rostral hindbrain to the caudal tip of the embryo.
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| TS17: neural tube |
Present |
Regionally restricted |
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Expression is in the dorsal 1/4 of the neural tube.
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| TS17: tail neural tube |
Present |
Regionally restricted |
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Expression is in the dorsal 1/4 of the neural tube.
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Specimen
5I:
embryonic day 10.5
(more )
Specimen
5I:
(close )
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Genetic Background:
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C57BL/6J
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Age:
|
embryonic day 10.5
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|
Sex:
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Not Specified
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Type:
|
section
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|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Paraffin
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS17: hindbrain |
Present |
Regionally restricted |
5I/J
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Expression is in the dorsal 1/4 of the neural tube from the rostral hindbrain to the caudal tip of the embryo.
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| TS17: neural tube |
Present |
Regionally restricted |
5I/J
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Expression is in the dorsal 1/4 of the neural tube.
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| TS17: tail neural tube |
Present |
Regionally restricted |
5I/J
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Expression is in the dorsal 1/4 of the neural tube.
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Specimen
5J:
embryonic day 10.5
(more )
Specimen
5J:
(close )
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Genetic Background:
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C57BL/6J
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Age:
|
embryonic day 10.5
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Sex:
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Not Specified
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Type:
|
section
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|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Paraffin
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS17: hindbrain |
Present |
Regionally restricted |
|
Expression is in the dorsal 1/4 of the neural tube from the rostral hindbrain to the caudal tip of the embryo.
|
| TS17: neural tube |
Present |
Regionally restricted |
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Expression is in the dorsal 1/4 of the neural tube.
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| TS17: tail neural tube |
Present |
Regionally restricted |
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Expression is in the dorsal 1/4 of the neural tube.
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Specimen
6A:
embryonic day 12.5
(more )
Specimen
6A:
(close )
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Genetic Background:
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C57BL/6J
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Age:
|
embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
|
|
Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: hindbrain |
Present |
Regionally restricted |
6A/B
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Expression is dorsal with a rostral boundary in the pons.
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| TS20: pons |
Present |
Regionally restricted |
6A/B
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Expression is dorsal with a rostral boundary in the pons.
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| TS20: spinal cord |
Present |
Regionally restricted |
6A/B
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Expression is dorsal.
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| TS20: tail spinal cord |
Present |
Regionally restricted |
6A/B
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Expression is dorsal.
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Specimen
6B:
embryonic day 12.5
(more )
Specimen
6B:
(close )
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Genetic Background:
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C57BL/6J
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Age:
|
embryonic day 12.5
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Sex:
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Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Paraffin
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: hindbrain |
Present |
Regionally restricted |
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Expression is dorsal with a rostral boundary in the pons.
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| TS20: pons |
Present |
Regionally restricted |
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Expression is dorsal with a rostral boundary in the pons.
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| TS20: spinal cord |
Present |
Regionally restricted |
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Expression is dorsal.
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| TS20: tail spinal cord |
Present |
Regionally restricted |
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Expression is dorsal.
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Specimen
6C:
embryonic day 12.5
(more )
Specimen
6C:
(close )
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Genetic Background:
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C57BL/6J
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Age:
|
embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
6D:
embryonic day 12.5
(more )
Specimen
6D:
(close )
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Genetic Background:
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C57BL/6J
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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|
Embedding:
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Paraffin
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Specimen
6E:
embryonic day 12.5
(more )
Specimen
6E:
(close )
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Genetic Background:
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C57BL/6J
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Age:
|
embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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|
Embedding:
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Paraffin
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Specimen
6F:
embryonic day 12.5
(more )
Specimen
6F:
(close )
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Genetic Background:
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C57BL/6J
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Age:
|
embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
6G:
embryonic day 12.5
(more )
Specimen
6G:
(close )
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Genetic Background:
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C57BL/6J
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
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|
Embedding:
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Paraffin
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Specimen
6H:
embryonic day 12.5
(more )
Specimen
6H:
(close )
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Genetic Background:
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C57BL/6J
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
|
Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: brain ventricular layer |
Present |
Regionally restricted |
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Expression is in the ventricular layer of the caudal brain.
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Specimen
6I:
embryonic day 14.5
(more )
Specimen
6I:
(close )
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Genetic Background:
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C57BL/6J
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
|
section
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Fixation:
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4% Paraformaldehyde
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|
Embedding:
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Paraffin
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Specimen
6J:
embryonic day 14.5
(more )
Specimen
6J:
(close )
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Genetic Background:
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C57BL/6J
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Age:
|
embryonic day 14.5
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Sex:
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Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: medulla oblongata |
Weak |
Regionally restricted |
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Expression is dorsal.
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| TS22: pons |
Weak |
Regionally restricted |
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Expression is dorsal.
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Specimen
7D:
embryonic day 9.0
(more )
Specimen
7D:
(close )
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Genetic Background:
|
C57BL/6J
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Age:
|
embryonic day 9.0
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Paraffin
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS14: neural tube |
Present |
Regionally restricted |
7D
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Expression is dorsal.
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Specimen
7H:
embryonic day 10.0
(more )
Specimen
7H:
(close )
|
Genetic Background:
|
C57BL/6J
|
|
Age:
|
embryonic day 10.0
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Paraffin
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS16: neural tube |
Present |
Regionally restricted |
7H
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Expression is dorsal.
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Specimen
7L:
embryonic day 10.5
(more )
Specimen
7L:
(close )
|
Genetic Background:
|
C57BL/6J
|
|
Age:
|
embryonic day 10.5
|
|
Sex:
|
Not Specified
|
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Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Paraffin
|
Specimen
8D:
embryonic day 12.5
(more )
Specimen
8D:
(close )
|
Genetic Background:
|
C57BL/6J
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|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Paraffin
|
Specimen
8H:
embryonic day 12.5
(more )
Specimen
8H:
(close )
|
Genetic Background:
|
C57BL/6J
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Paraffin
|
Specimen
8L:
embryonic day 12.5
(more )
Specimen
8L:
(close )
|
Genetic Background:
|
C57BL/6J
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Paraffin
|
Specimen
Not Shown:
embryonic day 16.5
(more )
Specimen
Not Shown:
(close )
|
Genetic Background:
|
C57BL/6J
|
|
Age:
|
embryonic day 16.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Paraffin
|
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Analysis Tools